Description : (q8gu92|pdr2_orysa : 1758.0) Probable pleiotropic drug resistance protein 2 - Oryza sativa (Rice) & (at1g15520 : 1687.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (reliability: 3374.0) & (original description: no original description)
Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00000867-RA | |
Cluster | HCCA clusters: Cluster_10 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
101338 | No alias | pleiotropic drug resistance 11 | 0.04 | Orthogroups_2024-Update | |
115821 | No alias | ABC-2 and Plant PDR ABC-type transporter family protein | 0.04 | Orthogroups_2024-Update | |
118688 | No alias | pleiotropic drug resistance 11 | 0.02 | Orthogroups_2024-Update | |
235359 | No alias | pleiotropic drug resistance 6 | 0.03 | Orthogroups_2024-Update | |
412710 | No alias | pleiotropic drug resistance 12 | 0.05 | Orthogroups_2024-Update | |
417266 | No alias | pleiotropic drug resistance 12 | 0.05 | Orthogroups_2024-Update | |
426328 | No alias | pleiotropic drug resistance 6 | 0.03 | Orthogroups_2024-Update | |
441717 | No alias | pleiotropic drug resistance 12 | 0.05 | Orthogroups_2024-Update | |
96758 | No alias | pleiotropic drug resistance 12 | 0.02 | Orthogroups_2024-Update | |
99541 | No alias | pleiotropic drug resistance 12 | 0.03 | Orthogroups_2024-Update | |
A4A49_00289 | No alias | abc transporter g family member 32 | 0.03 | Orthogroups_2024-Update | |
A4A49_09054 | No alias | pleiotropic drug resistance protein 1 | 0.04 | Orthogroups_2024-Update | |
A4A49_10347 | No alias | pleiotropic drug resistance protein 1 | 0.03 | Orthogroups_2024-Update | |
A4A49_20840 | No alias | abc transporter g family member 36 | 0.02 | Orthogroups_2024-Update | |
A4A49_38659 | No alias | pleiotropic drug resistance protein 1 | 0.02 | Orthogroups_2024-Update | |
At1g15520 | No alias | ABC transporter G family member 40... | 0.02 | Orthogroups_2024-Update | |
At1g59870 | No alias | ABC transporter G family member 36... | 0.03 | Orthogroups_2024-Update | |
Bradi4g28270 | No alias | pleiotropic drug resistance 12 | 0.02 | Orthogroups_2024-Update | |
GRMZM2G143139 | No alias | pleiotropic drug resistance 12 | 0.02 | Orthogroups_2024-Update | |
Glyma.02G159900 | No alias | pleiotropic drug resistance 11 | 0.02 | Orthogroups_2024-Update | |
Glyma.03G192700 | No alias | pleiotropic drug resistance 11 | 0.04 | Orthogroups_2024-Update | |
Glyma.04G069800 | No alias | pleiotropic drug resistance 12 | 0.03 | Orthogroups_2024-Update | |
Glyma.05G011900 | No alias | pleiotropic drug resistance 4 | 0.03 | Orthogroups_2024-Update | |
Glyma.07G015800 | No alias | ABC-2 and Plant PDR ABC-type transporter family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G361900 | No alias | pleiotropic drug resistance 12 | 0.02 | Orthogroups_2024-Update | |
Glyma.15G011900 | No alias | pleiotropic drug resistance 12 | 0.03 | Orthogroups_2024-Update | |
Glyma.17G206300 | No alias | pleiotropic drug resistance 12 | 0.03 | Orthogroups_2024-Update | |
Glyma.18G063400 | No alias | pleiotropic drug resistance 3 | 0.02 | Orthogroups_2024-Update | |
HORVU7Hr1G037750.28 | No alias | subfamily ABCG transporter | 0.02 | Orthogroups_2024-Update | |
Kfl00010_0550 | kfl00010_0550_v1.1 | (q76cu2|pdr1_tobac : 717.0) Pleiotropic drug resistance... | 0.01 | Orthogroups_2024-Update | |
LOC_Os01g42380 | No alias | pleiotropic drug resistance protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_10426781g0010 | No alias | (at2g36380 : 1292.0) pleiotropic drug resistance 6... | 0.04 | Orthogroups_2024-Update | |
MA_10427561g0010 | No alias | (q8gu88|pdr7_orysa : 1276.0) Putative pleiotropic drug... | 0.04 | Orthogroups_2024-Update | |
MA_10427683g0010 | No alias | (at1g59870 : 1105.0) ATP binding cassette transporter.... | 0.03 | Orthogroups_2024-Update | |
MA_12965g0010 | No alias | (q949g3|pdr1_nicpl : 544.0) Pleiotropic drug resistance... | 0.06 | Orthogroups_2024-Update | |
MA_135152g0010 | No alias | (q5z9s8|pdr12_orysa : 1938.0) Pleiotropic drug... | 0.03 | Orthogroups_2024-Update | |
MA_3894g0010 | No alias | (q76cu2|pdr1_tobac : 501.0) Pleiotropic drug resistance... | 0.03 | Orthogroups_2024-Update | |
Mp2g07030.1 | No alias | subfamily ABCG transporter | 0.02 | Orthogroups_2024-Update | |
Mp8g09300.1 | No alias | subfamily ABCG transporter | 0.02 | Orthogroups_2024-Update | |
PSME_00014724-RA | No alias | (q76cu2|pdr1_tobac : 1860.0) Pleiotropic drug resistance... | 0.05 | Orthogroups_2024-Update | |
PSME_00015395-RA | No alias | (q76cu2|pdr1_tobac : 1904.0) Pleiotropic drug resistance... | 0.04 | Orthogroups_2024-Update | |
Potri.001G251100 | No alias | pleiotropic drug resistance 3 | 0.03 | Orthogroups_2024-Update | |
Pp1s12_29V6 | No alias | atp-binding cassette | 0.02 | Orthogroups_2024-Update | |
Seita.2G179600.1 | No alias | subfamily ABCG transporter | 0.04 | Orthogroups_2024-Update | |
Seita.5G221500.1 | No alias | subfamily ABCG transporter | 0.04 | Orthogroups_2024-Update | |
Seita.5G221700.1 | No alias | subfamily ABCG transporter | 0.04 | Orthogroups_2024-Update | |
Sobic.002G203800.1 | No alias | subfamily ABCG transporter | 0.02 | Orthogroups_2024-Update | |
Sobic.003G216300.1 | No alias | subfamily ABCG transporter | 0.03 | Orthogroups_2024-Update | |
Solyc06g065670 | No alias | Pleiotropic drug resistance ABC transporter (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc12g098210 | No alias | Pleiotropic drug resistance ABC transporter (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
Solyc12g100180 | No alias | Pleiotropic drug resistance ABC transporter (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Sopen03g039810 | No alias | ABC-2 type transporter | 0.04 | Orthogroups_2024-Update | |
Sopen05g015600 | No alias | ABC-2 type transporter | 0.03 | Orthogroups_2024-Update | |
Sopen05g032100 | No alias | ABC-2 type transporter | 0.03 | Orthogroups_2024-Update | |
Sopen09g034570 | No alias | ABC-2 type transporter | 0.02 | Orthogroups_2024-Update | |
Sopen12g034810 | No alias | ABC-2 type transporter | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
CC | GO:0016020 | membrane | IEA | InterProScan predictions |
MF | GO:0016887 | ATPase activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0003997 | acyl-CoA oxidase activity | IEP | Predicted GO |
MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
MF | GO:0005506 | iron ion binding | IEP | Predicted GO |
CC | GO:0005777 | peroxisome | IEP | Predicted GO |
BP | GO:0005984 | disaccharide metabolic process | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006635 | fatty acid beta-oxidation | IEP | Predicted GO |
MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
BP | GO:0009062 | fatty acid catabolic process | IEP | Predicted GO |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | Predicted GO |
BP | GO:0009314 | response to radiation | IEP | Predicted GO |
BP | GO:0009416 | response to light stimulus | IEP | Predicted GO |
BP | GO:0009581 | detection of external stimulus | IEP | Predicted GO |
BP | GO:0009582 | detection of abiotic stimulus | IEP | Predicted GO |
BP | GO:0009583 | detection of light stimulus | IEP | Predicted GO |
BP | GO:0009584 | detection of visible light | IEP | Predicted GO |
BP | GO:0009605 | response to external stimulus | IEP | Predicted GO |
BP | GO:0009628 | response to abiotic stimulus | IEP | Predicted GO |
BP | GO:0016042 | lipid catabolic process | IEP | Predicted GO |
BP | GO:0016054 | organic acid catabolic process | IEP | Predicted GO |
MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Predicted GO |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Predicted GO |
MF | GO:0016740 | transferase activity | IEP | Predicted GO |
MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Predicted GO |
MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Predicted GO |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
BP | GO:0018298 | protein-chromophore linkage | IEP | Predicted GO |
BP | GO:0019395 | fatty acid oxidation | IEP | Predicted GO |
MF | GO:0020037 | heme binding | IEP | Predicted GO |
BP | GO:0030258 | lipid modification | IEP | Predicted GO |
BP | GO:0034440 | lipid oxidation | IEP | Predicted GO |
CC | GO:0042579 | microbody | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
BP | GO:0044242 | cellular lipid catabolic process | IEP | Predicted GO |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0046395 | carboxylic acid catabolic process | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
BP | GO:0051606 | detection of stimulus | IEP | Predicted GO |
BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | Predicted GO |
No external refs found! |