PSME_00002720-RA

Description : (p19951|rs142_maize : 226.0) 40S ribosomal protein S14 (Clone MCH2) - Zea mays (Maize) & (at3g11510 : 222.0) Ribosomal protein S11 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT2G36160.1); Has 8773 Blast hits to 8773 proteins in 2901 species: Archae - 250; Bacteria - 4863; Metazoa - 587; Fungi - 162; Plants - 736; Viruses - 0; Other Eukaryotes - 2175 (source: NCBI BLink). & (reliability: 444.0) & (original description: no original description)

Gene families : OG_42_0001574 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001574_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00002720-RA
Cluster	HCCA clusters: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
183051	No alias	Ribosomal protein S11 family protein	0.06	Orthogroups_2024-Update
At3g52580	No alias	40S ribosomal protein S14-3...	0.03	Orthogroups_2024-Update
Bradi1g32830	No alias	Ribosomal protein S11 family protein	0.07	Orthogroups_2024-Update
Bradi3g04790	No alias	Ribosomal protein S11 family protein	0.08	Orthogroups_2024-Update
Brara.A03404.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Brara.C01814.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Brara.C03369.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.08	Orthogroups_2024-Update
Brara.D02197.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Brara.E00860.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Brara.E02925.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Brara.I03565.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Brara.J02603.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Cre11.g480150	No alias	Ribosomal protein S11 family protein	0.07	Orthogroups_2024-Update
GRMZM2G069762	No alias	Ribosomal protein S11 family protein	0.07	Orthogroups_2024-Update
Glyma.03G241300	No alias	Ribosomal protein S11 family protein	0.03	Orthogroups_2024-Update
Glyma.13G217200	No alias	Ribosomal protein S11 family protein	0.03	Orthogroups_2024-Update
Glyma.15G095300	No alias	Ribosomal protein S11 family protein	0.04	Orthogroups_2024-Update
Glyma.19G238600	No alias	Ribosomal protein S11 family protein	0.03	Orthogroups_2024-Update
Glyma.19G238800	No alias	Ribosomal protein S11 family protein	0.04	Orthogroups_2024-Update
HORVU0Hr1G004130.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Kfl00094_0120	kfl00094_0120_v1.1	(p19951\|rs142_maize : 200.0) 40S ribosomal protein S14...	0.02	Orthogroups_2024-Update
LOC_Os02g06700	No alias	ribosomal protein, putative, expressed	0.04	Orthogroups_2024-Update
MA_113075g0010	No alias	(p19951\|rs142_maize : 223.0) 40S ribosomal protein S14...	0.07	Orthogroups_2024-Update
Mp8g03250.1	No alias	component RPS14 of SSU proteome	0.03	Orthogroups_2024-Update
Mp8g10900.1	No alias	component RPS14 of SSU proteome	0.03	Orthogroups_2024-Update
Potri.001G218700	No alias	Ribosomal protein S11 family protein	0.05	Orthogroups_2024-Update
Potri.004G131800	No alias	Ribosomal protein S11 family protein	0.04	Orthogroups_2024-Update
Pp1s271_98V6	No alias	40s ribosomal protein	0.1	Orthogroups_2024-Update
Pp1s316_6V6	No alias	40s ribosomal protein	0.08	Orthogroups_2024-Update
Seita.1G181800.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Seita.4G260200.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.1	Orthogroups_2024-Update
Seita.7G091900.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Sobic.006G106100.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Sobic.010G205400.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.08	Orthogroups_2024-Update
Sobic.010G206200.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.1	Orthogroups_2024-Update
Solyc02g070570	No alias	30S ribosomal protein S11 (AHRD V3.3 *** A0A0K9PCU6_ZOSMR)	0.07	Orthogroups_2024-Update
Solyc09g010100	No alias	30S ribosomal protein S11 (AHRD V3.3 *** A0A0K9PVQ7_ZOSMR)	0.11	Orthogroups_2024-Update
Solyc10g083280	No alias	40S ribosomal protein S14-2	0.07	Orthogroups_2024-Update
Sopen02g019660	No alias	Ribosomal protein S11	0.08	Orthogroups_2024-Update
Sopen09g004840	No alias	Ribosomal protein S11	0.06	Orthogroups_2024-Update
Sopen10g032760	No alias	Ribosomal protein S11	0.09	Orthogroups_2024-Update
evm.model.contig_3384.21	No alias	(p46295\|rs14_chlre : 213.0) 40S ribosomal protein S14 -...	0.1	Orthogroups_2024-Update
evm.model.tig00001154.44	No alias	(p19950\|rs141_maize : 166.0) 40S ribosomal protein S14...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Predicted GO
BP	GO:0002097	tRNA wobble base modification	IEP	Predicted GO
BP	GO:0002098	tRNA wobble uridine modification	IEP	Predicted GO
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Predicted GO
MF	GO:0004175	endopeptidase activity	IEP	Predicted GO
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004359	glutaminase activity	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005739	mitochondrion	IEP	Predicted GO
CC	GO:0005747	mitochondrial respiratory chain complex I	IEP	Predicted GO
CC	GO:0005839	proteasome core complex	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006400	tRNA modification	IEP	Predicted GO
BP	GO:0006457	protein folding	IEP	Predicted GO
BP	GO:0006766	vitamin metabolic process	IEP	Predicted GO
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Predicted GO
BP	GO:0007034	vacuolar transport	IEP	Predicted GO
MF	GO:0008233	peptidase activity	IEP	Predicted GO
BP	GO:0009110	vitamin biosynthetic process	IEP	Predicted GO
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Predicted GO
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Predicted GO
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015672	monovalent inorganic cation transport	IEP	Predicted GO
CC	GO:0015934	large ribosomal subunit	IEP	Predicted GO
CC	GO:0016272	prefoldin complex	IEP	Predicted GO
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	Predicted GO
CC	GO:0016471	vacuolar proton-transporting V-type ATPase complex	IEP	Predicted GO
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Predicted GO
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predicted GO
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predicted GO
BP	GO:0019725	cellular homeostasis	IEP	Predicted GO
MF	GO:0019829	cation-transporting ATPase activity	IEP	Predicted GO
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Predicted GO
CC	GO:0030880	RNA polymerase complex	IEP	Predicted GO
CC	GO:0030964	NADH dehydrogenase complex	IEP	Predicted GO
BP	GO:0032774	RNA biosynthetic process	IEP	Predicted GO
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	Predicted GO
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	Predicted GO
CC	GO:0033588	Elongator holoenzyme complex	IEP	Predicted GO
BP	GO:0034220	ion transmembrane transport	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0042592	homeostatic process	IEP	Predicted GO
MF	GO:0042623	ATPase activity, coupled	IEP	Predicted GO
MF	GO:0042625	ATPase coupled ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Predicted GO
BP	GO:0042816	vitamin B6 metabolic process	IEP	Predicted GO
BP	GO:0042819	vitamin B6 biosynthetic process	IEP	Predicted GO
BP	GO:0042822	pyridoxal phosphate metabolic process	IEP	Predicted GO
BP	GO:0042823	pyridoxal phosphate biosynthetic process	IEP	Predicted GO
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Predicted GO
CC	GO:0044391	ribosomal subunit	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044429	mitochondrial part	IEP	Predicted GO
CC	GO:0044437	vacuolar part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
CC	GO:0044455	mitochondrial membrane part	IEP	Predicted GO
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	Predicted GO
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Predicted GO
CC	GO:0045271	respiratory chain complex I	IEP	Predicted GO
BP	GO:0045454	cell redox homeostasis	IEP	Predicted GO
BP	GO:0046184	aldehyde biosynthetic process	IEP	Predicted GO
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	Predicted GO
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Predicted GO
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Predicted GO
BP	GO:0065008	regulation of biological quality	IEP	Predicted GO
MF	GO:0070003	threonine-type peptidase activity	IEP	Predicted GO
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Predicted GO
BP	GO:0098655	cation transmembrane transport	IEP	Predicted GO
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predicted GO
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO
CC	GO:0098798	mitochondrial protein complex	IEP	Predicted GO
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Predicted GO
CC	GO:0098803	respiratory chain complex	IEP	Predicted GO
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predicted GO
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Predicted GO
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Predicted GO
CC	GO:1902494	catalytic complex	IEP	Predicted GO
BP	GO:1902600	proton transmembrane transport	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001971	Ribosomal_S11	70	188

External Links

No external refs found!

PSME_00002720-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation