Coexpression cluster: Cluster_45 (HCCA clusters)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043043 peptide biosynthetic process 27.06% (23/85) 4.81 0.0 0.0
GO:0003735 structural constituent of ribosome 27.06% (23/85) 4.83 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 31.76% (27/85) 4.17 0.0 0.0
GO:0005198 structural molecule activity 27.06% (23/85) 4.73 0.0 0.0
GO:0006518 peptide metabolic process 27.06% (23/85) 4.76 0.0 0.0
GO:0044444 cytoplasmic part 30.59% (26/85) 4.29 0.0 0.0
GO:0043604 amide biosynthetic process 27.06% (23/85) 4.76 0.0 0.0
GO:0009059 macromolecule biosynthetic process 31.76% (27/85) 4.13 0.0 0.0
GO:0043603 cellular amide metabolic process 27.06% (23/85) 4.7 0.0 0.0
GO:0006412 translation 27.06% (23/85) 4.84 0.0 0.0
GO:1990904 ribonucleoprotein complex 27.06% (23/85) 4.64 0.0 0.0
GO:0005840 ribosome 25.88% (22/85) 4.78 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 25.88% (22/85) 4.56 0.0 0.0
GO:0043228 non-membrane-bounded organelle 25.88% (22/85) 4.56 0.0 0.0
GO:0032991 protein-containing complex 34.12% (29/85) 3.65 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 29.41% (25/85) 4.09 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 28.24% (24/85) 4.03 0.0 0.0
GO:0044249 cellular biosynthetic process 32.94% (28/85) 3.39 0.0 0.0
GO:1901576 organic substance biosynthetic process 32.94% (28/85) 3.31 0.0 0.0
GO:0009058 biosynthetic process 32.94% (28/85) 3.15 0.0 0.0
GO:0005622 intracellular 18.82% (16/85) 4.87 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 31.76% (27/85) 3.18 0.0 0.0
GO:0043226 organelle 27.06% (23/85) 3.55 0.0 0.0
GO:0043229 intracellular organelle 27.06% (23/85) 3.55 0.0 0.0
GO:0044424 intracellular part 32.94% (28/85) 3.02 0.0 0.0
GO:0044464 cell part 32.94% (28/85) 2.83 0.0 0.0
GO:0005575 cellular_component 37.65% (32/85) 1.82 0.0 0.0
GO:0044267 cellular protein metabolic process 27.06% (23/85) 1.97 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 29.41% (25/85) 1.7 0.0 1e-06
GO:0043170 macromolecule metabolic process 31.76% (27/85) 1.52 0.0 2e-06
GO:0019538 protein metabolic process 27.06% (23/85) 1.71 0.0 2e-06
GO:0006807 nitrogen compound metabolic process 31.76% (27/85) 1.47 0.0 3e-06
GO:0009987 cellular process 36.47% (31/85) 1.28 1e-06 6e-06
GO:0044237 cellular metabolic process 32.94% (28/85) 1.37 1e-06 8e-06
GO:1901564 organonitrogen compound metabolic process 28.24% (24/85) 1.53 1e-06 9e-06
GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity 2.35% (2/85) 8.14 1.7e-05 0.000107
GO:0008250 oligosaccharyltransferase complex 2.35% (2/85) 8.14 1.7e-05 0.000107
GO:0004576 oligosaccharyl transferase activity 2.35% (2/85) 7.4 5.5e-05 0.000347
GO:0071704 organic substance metabolic process 32.94% (28/85) 0.97 0.000222 0.001358
GO:0044238 primary metabolic process 30.59% (26/85) 0.93 0.000634 0.003791
GO:1990234 transferase complex 3.53% (3/85) 4.14 0.00068 0.003964
GO:0098796 membrane protein complex 4.71% (4/85) 3.31 0.000731 0.004157
GO:0044432 endoplasmic reticulum part 2.35% (2/85) 4.97 0.001873 0.010412
GO:0032774 RNA biosynthetic process 3.53% (3/85) 3.59 0.002021 0.010977
GO:0006352 DNA-templated transcription, initiation 2.35% (2/85) 4.81 0.002311 0.012006
GO:1902494 catalytic complex 3.53% (3/85) 3.53 0.002307 0.012252
GO:0034311 diol metabolic process 1.18% (1/85) 7.72 0.004732 0.019843
GO:0034312 diol biosynthetic process 1.18% (1/85) 7.72 0.004732 0.019843
GO:0046146 tetrahydrobiopterin metabolic process 1.18% (1/85) 7.72 0.004732 0.019843
GO:0015934 large ribosomal subunit 1.18% (1/85) 7.72 0.004732 0.019843
GO:0044391 ribosomal subunit 1.18% (1/85) 7.72 0.004732 0.019843
GO:0016469 proton-transporting two-sector ATPase complex 1.18% (1/85) 7.72 0.004732 0.019843
GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity 1.18% (1/85) 7.72 0.004732 0.019843
GO:0006729 tetrahydrobiopterin biosynthetic process 1.18% (1/85) 7.72 0.004732 0.019843
GO:0033176 proton-transporting V-type ATPase complex 1.18% (1/85) 7.72 0.004732 0.019843
GO:0016471 vacuolar proton-transporting V-type ATPase complex 1.18% (1/85) 7.72 0.004732 0.019843
GO:0019438 aromatic compound biosynthetic process 4.71% (4/85) 2.53 0.005254 0.021651
GO:0018130 heterocycle biosynthetic process 4.71% (4/85) 2.57 0.004709 0.023948
GO:0046165 alcohol biosynthetic process 1.18% (1/85) 7.14 0.00709 0.02778
GO:0046173 polyol biosynthetic process 1.18% (1/85) 7.14 0.00709 0.02778
GO:0044437 vacuolar part 1.18% (1/85) 7.14 0.00709 0.02778
GO:1902600 proton transmembrane transport 2.35% (2/85) 3.97 0.007327 0.028245
GO:1901362 organic cyclic compound biosynthetic process 4.71% (4/85) 2.31 0.008789 0.032823
GO:0006457 protein folding 2.35% (2/85) 3.84 0.008694 0.032983
GO:1901617 organic hydroxy compound biosynthetic process 1.18% (1/85) 6.72 0.009443 0.033189
GO:0016272 prefoldin complex 1.18% (1/85) 6.72 0.009443 0.033189
GO:0042559 pteridine-containing compound biosynthetic process 1.18% (1/85) 6.72 0.009443 0.033189
GO:0003924 GTPase activity 3.53% (3/85) 2.81 0.009076 0.03337
GO:0006452 translational frameshifting 1.18% (1/85) 6.14 0.014131 0.041187
GO:0006448 regulation of translational elongation 1.18% (1/85) 6.14 0.014131 0.041187
GO:0042558 pteridine-containing compound metabolic process 1.18% (1/85) 6.14 0.014131 0.041187
GO:0006417 regulation of translation 1.18% (1/85) 6.14 0.014131 0.041187
GO:0006449 regulation of translational termination 1.18% (1/85) 6.14 0.014131 0.041187
GO:0034248 regulation of cellular amide metabolic process 1.18% (1/85) 6.14 0.014131 0.041187
GO:0010608 posttranscriptional regulation of gene expression 1.18% (1/85) 6.14 0.014131 0.041187
GO:0045905 positive regulation of translational termination 1.18% (1/85) 6.14 0.014131 0.041187
GO:0045901 positive regulation of translational elongation 1.18% (1/85) 6.14 0.014131 0.041187
GO:0045727 positive regulation of translation 1.18% (1/85) 6.14 0.014131 0.041187
GO:0043243 positive regulation of protein complex disassembly 1.18% (1/85) 6.14 0.014131 0.041187
GO:0034250 positive regulation of cellular amide metabolic process 1.18% (1/85) 6.14 0.014131 0.041187
GO:0032270 positive regulation of cellular protein metabolic process 1.18% (1/85) 6.14 0.014131 0.041187
GO:0051247 positive regulation of protein metabolic process 1.18% (1/85) 6.14 0.014131 0.041187
GO:0030880 RNA polymerase complex 1.18% (1/85) 5.91 0.016467 0.047417
GO:0001883 purine nucleoside binding 3.53% (3/85) 2.39 0.019958 0.048673
GO:0032561 guanyl ribonucleotide binding 3.53% (3/85) 2.39 0.019958 0.048673
GO:0005525 GTP binding 3.53% (3/85) 2.39 0.019958 0.048673
GO:0032549 ribonucleoside binding 3.53% (3/85) 2.39 0.019958 0.048673
GO:0032550 purine ribonucleoside binding 3.53% (3/85) 2.39 0.019958 0.048673
GO:0001882 nucleoside binding 3.53% (3/85) 2.38 0.020174 0.048702
GO:0010557 positive regulation of macromolecule biosynthetic process 1.18% (1/85) 5.72 0.018798 0.048833
GO:0051173 positive regulation of nitrogen compound metabolic process 1.18% (1/85) 5.72 0.018798 0.048833
GO:0009893 positive regulation of metabolic process 1.18% (1/85) 5.72 0.018798 0.048833
GO:0031325 positive regulation of cellular metabolic process 1.18% (1/85) 5.72 0.018798 0.048833
GO:0031328 positive regulation of cellular biosynthetic process 1.18% (1/85) 5.72 0.018798 0.048833
GO:0009891 positive regulation of biosynthetic process 1.18% (1/85) 5.72 0.018798 0.048833
GO:0010628 positive regulation of gene expression 1.18% (1/85) 5.72 0.018798 0.048833
GO:0010604 positive regulation of macromolecule metabolic process 1.18% (1/85) 5.72 0.018798 0.048833
GO:0051130 positive regulation of cellular component organization 1.18% (1/85) 5.55 0.021122 0.049012
GO:0043244 regulation of protein complex disassembly 1.18% (1/85) 5.55 0.021122 0.049012
GO:0043022 ribosome binding 1.18% (1/85) 5.55 0.021122 0.049012
GO:0019001 guanyl nucleotide binding 3.53% (3/85) 2.37 0.020609 0.049255
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_26 0.037 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_55 0.038 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_96 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_102 0.078 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_205 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_58 0.102 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_84 0.071 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_149 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_164 0.023 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_231 0.048 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_6 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_8 0.026 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_25 0.027 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_99 0.025 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_141 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_164 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_175 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_186 0.034 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_243 0.024 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_32 0.02 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_58 0.139 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_116 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_24 0.075 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_98 0.021 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_20 0.079 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_90 0.027 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_111 0.05 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_166 0.028 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_220 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_7 0.051 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_13 0.038 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_64 0.035 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_87 0.086 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_130 0.037 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_147 0.039 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_176 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_298 0.095 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_25 0.116 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_13 0.029 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_23 0.046 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_54 0.029 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_87 0.03 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_117 0.061 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_121 0.033 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_57 0.093 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_132 0.043 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_157 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_239 0.043 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_44 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_49 0.039 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_76 0.101 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_110 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_158 0.046 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_212 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_290 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_300 0.039 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_324 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_334 0.03 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_382 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_421 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_440 0.045 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_489 0.024 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_29 0.054 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_112 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_148 0.028 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_21 0.089 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_22 0.032 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_35 0.079 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_130 0.027 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_143 0.036 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_189 0.022 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0029 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0017 0.023 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0021 0.049 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0027 0.033 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0028 0.034 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0055 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0071 0.042 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0073 0.023 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0098 0.036 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0143 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_8 0.066 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_10 0.103 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_24 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_91 0.032 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_102 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.035 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_118 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_167 0.076 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_203 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_254 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_282 0.032 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_40 0.066 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_61 0.044 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_86 0.024 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_145 0.037 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_148 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_168 0.067 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_182 0.025 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_246 0.04 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_249 0.033 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_24 0.11 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_75 0.038 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_124 0.065 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_174 0.038 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_37 0.094 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_75 0.026 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_89 0.029 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_120 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_143 0.025 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_265 0.043 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_18 0.026 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_31 0.024 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_56 0.026 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_61 0.056 Orthogroups_2024-Update Compare
Sequences (85) (download table)

InterPro Domains

GO Terms

Family Terms