PSME_00005546-RA

Description : (at2g17930 : 4469.0) Phosphatidylinositol 3- and 4-kinase family protein with FAT domain; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase, FATC (InterPro:IPR003152), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (TAIR:AT4G36080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 8938.0) & (original description: no original description)

Gene families : OG_42_0004014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004014_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00005546-RA
Cluster	HCCA clusters: Cluster_86

Target	Alias	Description	ECC score	Gene Family Method
98463	No alias	Phosphatidylinositol 3- and 4-kinase family protein with...	0.04	Orthogroups_2024-Update
At2g17930	No alias	Phosphatidylinositol 3-and 4-kinase family protein with...	0.04	Orthogroups_2024-Update
Bradi1g19650	No alias	Phosphatidylinositol 3- and 4-kinase family protein with...	0.05	Orthogroups_2024-Update
Glyma.11G077000	No alias	Phosphatidylinositol 3- and 4-kinase family protein with...	0.05	Orthogroups_2024-Update
Kfl00192_0160	kfl00192_0160_v1.1	(at4g36080 : 4007.0) phosphotransferases, alcohol group...	0.03	Orthogroups_2024-Update
LOC_Os07g45064	No alias	Phosphatidylinositol kinase and FAT containing domain...	0.03	Orthogroups_2024-Update
MA_10427352g0010	No alias	(at2g17930 : 666.0) Phosphatidylinositol 3- and 4-kinase...	0.04	Orthogroups_2024-Update
Mp5g23620.1	No alias	component TRA1 of SAGA transcription co-activator...	0.02	Orthogroups_2024-Update
Seita.2G412100.1	No alias	component *(TRA1) of SAGA transcription co-activator...	0.05	Orthogroups_2024-Update
Sopen02g028690	No alias	FAT domain	0.02	Orthogroups_2024-Update
evm.model.tig00021537.68	No alias	(at2g17930 : 373.0) Phosphatidylinositol 3- and 4-kinase...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Predicted GO
MF	GO:0003712	transcription coregulator activity	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
MF	GO:0005086	ARF guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005096	GTPase activator activity	IEP	Predicted GO
CC	GO:0005665	RNA polymerase II, core complex	IEP	Predicted GO
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Predicted GO
BP	GO:0006366	transcription by RNA polymerase II	IEP	Predicted GO
BP	GO:0006476	protein deacetylation	IEP	Predicted GO
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	IEP	Predicted GO
BP	GO:0009314	response to radiation	IEP	Predicted GO
BP	GO:0009416	response to light stimulus	IEP	Predicted GO
BP	GO:0009581	detection of external stimulus	IEP	Predicted GO
BP	GO:0009582	detection of abiotic stimulus	IEP	Predicted GO
BP	GO:0009583	detection of light stimulus	IEP	Predicted GO
BP	GO:0009584	detection of visible light	IEP	Predicted GO
BP	GO:0009605	response to external stimulus	IEP	Predicted GO
BP	GO:0009966	regulation of signal transduction	IEP	Predicted GO
BP	GO:0010646	regulation of cell communication	IEP	Predicted GO
BP	GO:0016575	histone deacetylation	IEP	Predicted GO
CC	GO:0016592	mediator complex	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
BP	GO:0018298	protein-chromophore linkage	IEP	Predicted GO
BP	GO:0023051	regulation of signaling	IEP	Predicted GO
CC	GO:0030880	RNA polymerase complex	IEP	Predicted GO
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Predicted GO
BP	GO:0035601	protein deacylation	IEP	Predicted GO
CC	GO:0044428	nuclear part	IEP	Predicted GO
CC	GO:0044451	nucleoplasm part	IEP	Predicted GO
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Predicted GO
BP	GO:0048583	regulation of response to stimulus	IEP	Predicted GO
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Predicted GO
BP	GO:0051606	detection of stimulus	IEP	Predicted GO
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	Predicted GO
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Predicted GO
BP	GO:0098732	macromolecule deacylation	IEP	Predicted GO
CC	GO:1902494	catalytic complex	IEP	Predicted GO
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Predicted GO
CC	GO:1990234	transferase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003151	PIK-rel_kinase_FAT	2543	2882

External Links

No external refs found!

PSME_00005546-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation