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  5. PSME_00009237-RA

PSME_00009237-RA


Description : (at1g48090 : 378.0) calcium-dependent lipid-binding family protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Protein of unknown function DUF946 (InterPro:IPR009291), Vacuolar protein sorting-associated protein (InterPro:IPR009543), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973); BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein (TAIR:AT4G17140.2); Has 2732 Blast hits to 1481 proteins in 212 species: Archae - 2; Bacteria - 15; Metazoa - 1181; Fungi - 466; Plants - 461; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (reliability: 756.0) & (original description: no original description)


Gene families : OG_42_0000864 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00009237-RA
Cluster HCCA clusters: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
82033 No alias pleckstrin homology (PH) domain-containing protein 0.04 Orthogroups_2024-Update
At1g48090 No alias calcium-dependent lipid-binding family protein... 0.04 Orthogroups_2024-Update
Bradi3g43345 No alias calcium-dependent lipid-binding family protein 0.09 Orthogroups_2024-Update
Glyma.07G233100 No alias calcium-dependent lipid-binding family protein 0.04 Orthogroups_2024-Update
Kfl00451_0090 kfl00451_0090_v1.1 (at1g48090 : 1719.0) calcium-dependent lipid-binding... 0.03 Orthogroups_2024-Update
MA_10437247g0010 No alias (at4g17140 : 1094.0) pleckstrin homology (PH)... 0.04 Orthogroups_2024-Update
Pp1s17_376V6 No alias vacuolar protein sorting-associated 0.03 Orthogroups_2024-Update
evm.model.tig00000042.91 No alias (at4g17140 : 114.0) pleckstrin homology (PH)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
InterPro domains Description Start Stop
IPR009543 SHR-BD 21 272
No external refs found!