PSME_00015526-RA

Description : (at5g59850 : 244.0) Ribosomal protein S8 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cell wall, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: ribosomal protein S15A (TAIR:AT1G07770.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9at34|rs15a_dauca : 240.0) 40S ribosomal protein S15a - Daucus carota (Carrot) & (reliability: 488.0) & (original description: no original description)

Gene families : OG_42_0001161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001161_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00015526-RA
Cluster	HCCA clusters: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
228163	No alias	Ribosomal protein S8 family protein	0.07	Orthogroups_2024-Update
At5g59850	No alias	AT1G07770 protein [Source:UniProtKB/TrEMBL;Acc:B9DI04]	0.05	Orthogroups_2024-Update
Bradi2g23110	No alias	ribosomal protein S15A	0.08	Orthogroups_2024-Update
Bradi2g54450	No alias	ribosomal protein S15A	0.1	Orthogroups_2024-Update
Brara.B01062.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.09	Orthogroups_2024-Update
Brara.C01067.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.15	Orthogroups_2024-Update
Brara.F00468.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Brara.H02910.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
Brara.J01354.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Cre05.g234637	No alias	Ribosomal protein S8 family protein	0.12	Orthogroups_2024-Update
GRMZM2G083497	No alias	ribosomal protein S15A	0.1	Orthogroups_2024-Update
Glyma.01G240000	No alias	ribosomal protein S15A	0.05	Orthogroups_2024-Update
Glyma.07G255500	No alias	ribosomal protein S15A	0.04	Orthogroups_2024-Update
Glyma.11G003600	No alias	ribosomal protein S15A	0.04	Orthogroups_2024-Update
Glyma.11G003700	No alias	ribosomal protein S15A	0.04	Orthogroups_2024-Update
Glyma.15G102550	No alias	ribosomal protein S15A	0.07	Orthogroups_2024-Update
Glyma.17G018600	No alias	ribosomal protein S15A	0.09	Orthogroups_2024-Update
HORVU1Hr1G072060.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
HORVU3Hr1G086930.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.1	Orthogroups_2024-Update
Kfl00864_0040	kfl00864_0040_v1.1	(at5g59850 : 230.0) Ribosomal protein S8 family protein;...	0.05	Orthogroups_2024-Update
LOC_Os02g27760	No alias	40S ribosomal protein S15a, putative, expressed	0.04	Orthogroups_2024-Update
LOC_Os07g10720	No alias	40S ribosomal protein S15a, putative, expressed	0.02	Orthogroups_2024-Update
MA_10427318g0020	No alias	(at3g46040 : 214.0) Regulated by TCP20.; ribosomal...	0.07	Orthogroups_2024-Update
MA_57835g0010	No alias	(at3g46040 : 223.0) Regulated by TCP20.; ribosomal...	0.08	Orthogroups_2024-Update
MA_82191g0010	No alias	(at3g46040 : 223.0) Regulated by TCP20.; ribosomal...	0.04	Orthogroups_2024-Update
Mp8g06510.1	No alias	component RPS15a of SSU proteome	0.09	Orthogroups_2024-Update
Mp8g13010.1	No alias	component RPS15a of SSU proteome	0.08	Orthogroups_2024-Update
Potri.001G118100	No alias	ribosomal protein S15A	0.09	Orthogroups_2024-Update
Potri.010G208700	No alias	Ribosomal protein S8 family protein	0.04	Orthogroups_2024-Update
Pp1s115_101V6	No alias	40s ribosomal protein s15a	0.07	Orthogroups_2024-Update
Pp1s1_304V6	No alias	40s ribosomal protein s15a	0.05	Orthogroups_2024-Update
Pp1s426_18V6	No alias	40s ribosomal protein s15a	0.02	Orthogroups_2024-Update
Pp1s45_88V6	No alias	40s ribosomal protein s15a	0.04	Orthogroups_2024-Update
Seita.2G319400.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.09	Orthogroups_2024-Update
Seita.4G092300.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
Seita.5G374600.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Seita.8G174900.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Sobic.003G012700.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.11	Orthogroups_2024-Update
Sobic.007G212600.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.09	Orthogroups_2024-Update
Sopen04g025860	No alias	Ribosomal protein S8	0.08	Orthogroups_2024-Update
Sopen04g026010	No alias	Ribosomal protein S8	0.04	Orthogroups_2024-Update
Sopen04g026020	No alias	Ribosomal protein S8	0.1	Orthogroups_2024-Update
evm.model.contig_2045.5	No alias	(at5g59850 : 190.0) Ribosomal protein S8 family protein;...	0.13	Orthogroups_2024-Update
evm.model.tig00000158.110	No alias	(q9at34\|rs15a_dauca : 210.0) 40S ribosomal protein S15a...	0.11	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Predicted GO
MF	GO:0001882	nucleoside binding	IEP	Predicted GO
MF	GO:0001883	purine nucleoside binding	IEP	Predicted GO
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Predicted GO
MF	GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity	IEP	Predicted GO
MF	GO:0005525	GTP binding	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005743	mitochondrial inner membrane	IEP	Predicted GO
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	Predicted GO
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	Predicted GO
BP	GO:0006351	transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
CC	GO:0008250	oligosaccharyltransferase complex	IEP	Predicted GO
MF	GO:0015078	proton transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015672	monovalent inorganic cation transport	IEP	Predicted GO
CC	GO:0015934	large ribosomal subunit	IEP	Predicted GO
BP	GO:0015988	energy coupled proton transmembrane transport, against electrochemical gradient	IEP	Predicted GO
BP	GO:0015991	ATP hydrolysis coupled proton transport	IEP	Predicted GO
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	Predicted GO
CC	GO:0016471	vacuolar proton-transporting V-type ATPase complex	IEP	Predicted GO
CC	GO:0016592	mediator complex	IEP	Predicted GO
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predicted GO
MF	GO:0019001	guanyl nucleotide binding	IEP	Predicted GO
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predicted GO
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Predicted GO
MF	GO:0019829	cation-transporting ATPase activity	IEP	Predicted GO
CC	GO:0019866	organelle inner membrane	IEP	Predicted GO
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0022904	respiratory electron transport chain	IEP	Predicted GO
CC	GO:0030008	TRAPP complex	IEP	Predicted GO
CC	GO:0031090	organelle membrane	IEP	Predicted GO
CC	GO:0031966	mitochondrial membrane	IEP	Predicted GO
MF	GO:0032549	ribonucleoside binding	IEP	Predicted GO
MF	GO:0032550	purine ribonucleoside binding	IEP	Predicted GO
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0032774	RNA biosynthetic process	IEP	Predicted GO
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	Predicted GO
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	Predicted GO
BP	GO:0034220	ion transmembrane transport	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
MF	GO:0042623	ATPase activity, coupled	IEP	Predicted GO
MF	GO:0042625	ATPase coupled ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Predicted GO
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Predicted GO
CC	GO:0044391	ribosomal subunit	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044429	mitochondrial part	IEP	Predicted GO
CC	GO:0044437	vacuolar part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
CC	GO:0044455	mitochondrial membrane part	IEP	Predicted GO
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	Predicted GO
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Predicted GO
CC	GO:0045275	respiratory chain complex III	IEP	Predicted GO
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	Predicted GO
CC	GO:0070069	cytochrome complex	IEP	Predicted GO
BP	GO:0090662	ATP hydrolysis coupled transmembrane transport	IEP	Predicted GO
BP	GO:0097659	nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:0098655	cation transmembrane transport	IEP	Predicted GO
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predicted GO
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO
CC	GO:0098798	mitochondrial protein complex	IEP	Predicted GO
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Predicted GO
CC	GO:0098803	respiratory chain complex	IEP	Predicted GO
BP	GO:0099131	ATP hydrolysis coupled ion transmembrane transport	IEP	Predicted GO
BP	GO:0099132	ATP hydrolysis coupled cation transmembrane transport	IEP	Predicted GO
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Predicted GO
CC	GO:1902494	catalytic complex	IEP	Predicted GO
BP	GO:1902600	proton transmembrane transport	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000630	Ribosomal_S8	7	130

External Links

No external refs found!

PSME_00015526-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation