Description : (at3g05560 : 145.0) Ribosomal L22e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22e (InterPro:IPR002671); BEST Arabidopsis thaliana protein match is: Ribosomal L22e protein family (TAIR:AT5G27770.1); Has 686 Blast hits to 686 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 136; Plants - 114; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description)
Gene families : OG_42_0001702 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001702_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00024504-RA | |
Cluster | HCCA clusters: Cluster_193 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
270704 | No alias | Ribosomal L22e protein family | 0.09 | Orthogroups_2024-Update | |
A4A49_00389 | No alias | 60s ribosomal protein l22-2 | 0.08 | Orthogroups_2024-Update | |
At3g05560 | No alias | 60S ribosomal protein L22-2... | 0.06 | Orthogroups_2024-Update | |
Bradi1g62830 | No alias | Ribosomal L22e protein family | 0.04 | Orthogroups_2024-Update | |
Brara.A03699.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
Brara.C03109.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Brara.E03358.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.12 | Orthogroups_2024-Update | |
Brara.F02844.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Cre07.g357850 | No alias | Ribosomal L22e protein family | 0.15 | Orthogroups_2024-Update | |
GRMZM2G134107 | No alias | Ribosomal L22e protein family | 0.05 | Orthogroups_2024-Update | |
Glyma.02G017800 | No alias | Ribosomal L22e protein family | 0.04 | Orthogroups_2024-Update | |
Glyma.03G235000 | No alias | Ribosomal L22e protein family | 0.05 | Orthogroups_2024-Update | |
Glyma.19G232700 | No alias | Ribosomal L22e protein family | 0.05 | Orthogroups_2024-Update | |
Glyma.20G237000 | No alias | Ribosomal L22e protein family | 0.07 | Orthogroups_2024-Update | |
HORVU2Hr1G019160.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
HORVU7Hr1G080630.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
Kfl00104_0130 | kfl00104_0130_v1.1 | (at5g27770 : 144.0) Ribosomal L22e protein family;... | 0.05 | Orthogroups_2024-Update | |
LOC_Os03g22340 | No alias | 60S ribosomal protein L22-2, putative, expressed | 0.04 | Orthogroups_2024-Update | |
LOC_Os07g47710 | No alias | 60S ribosomal protein L22-2, putative, expressed | 0.05 | Orthogroups_2024-Update | |
Mp4g02920.1 | No alias | component RPL22 of LSU proteome component | 0.02 | Orthogroups_2024-Update | |
Potri.005G024400 | No alias | Ribosomal L22e protein family | 0.05 | Orthogroups_2024-Update | |
Potri.010G012700 | No alias | Ribosomal L22e protein family | 0.1 | Orthogroups_2024-Update | |
Potri.013G015300 | No alias | Ribosomal L22e protein family | 0.07 | Orthogroups_2024-Update | |
Potri.014G128800 | No alias | Ribosomal L22e protein family | 0.04 | Orthogroups_2024-Update | |
Pp1s283_20V6 | No alias | 60s ribosomal protein | 0.13 | Orthogroups_2024-Update | |
Pp1s457_15V6 | No alias | 60s ribosomal protein | 0.08 | Orthogroups_2024-Update | |
Seita.2G429500.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Seita.9G409100.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Sobic.001G376600.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
Sobic.002G414700.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Solyc01g099830 | No alias | 60S ribosomal protein L22-2 (AHRD V3.3 *** W9QTY3_9ROSA) | 0.11 | Orthogroups_2024-Update | |
Solyc09g075150 | No alias | 60S ribosomal protein L22-2 (AHRD V3.3 *** RL222_ARATH) | 0.11 | Orthogroups_2024-Update | |
Sopen01g043340 | No alias | Ribosomal L22e protein family | 0.12 | Orthogroups_2024-Update | |
Sopen09g029970 | No alias | Ribosomal L22e protein family | 0.04 | Orthogroups_2024-Update | |
Sopen09g029980 | No alias | Ribosomal L22e protein family | 0.05 | Orthogroups_2024-Update | |
evm.model.contig_2121.19 | No alias | (at3g05560 : 87.0) Ribosomal L22e protein family;... | 0.09 | Orthogroups_2024-Update | |
evm.model.tig00001206.7 | No alias | (at3g05560 : 112.0) Ribosomal L22e protein family;... | 0.09 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000275 | mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | IEP | Predicted GO |
MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0004359 | glutaminase activity | IEP | Predicted GO |
CC | GO:0005743 | mitochondrial inner membrane | IEP | Predicted GO |
CC | GO:0005750 | mitochondrial respiratory chain complex III | IEP | Predicted GO |
CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
CC | GO:0005875 | microtubule associated complex | IEP | Predicted GO |
BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Predicted GO |
BP | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | IEP | Predicted GO |
BP | GO:0006351 | transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0006457 | protein folding | IEP | Predicted GO |
BP | GO:0006508 | proteolysis | IEP | Predicted GO |
BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015672 | monovalent inorganic cation transport | IEP | Predicted GO |
BP | GO:0015988 | energy coupled proton transmembrane transport, against electrochemical gradient | IEP | Predicted GO |
BP | GO:0015991 | ATP hydrolysis coupled proton transport | IEP | Predicted GO |
CC | GO:0016272 | prefoldin complex | IEP | Predicted GO |
CC | GO:0016469 | proton-transporting two-sector ATPase complex | IEP | Predicted GO |
CC | GO:0016471 | vacuolar proton-transporting V-type ATPase complex | IEP | Predicted GO |
BP | GO:0016485 | protein processing | IEP | Predicted GO |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Predicted GO |
MF | GO:0019829 | cation-transporting ATPase activity | IEP | Predicted GO |
CC | GO:0019866 | organelle inner membrane | IEP | Predicted GO |
MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0022904 | respiratory electron transport chain | IEP | Predicted GO |
CC | GO:0030286 | dynein complex | IEP | Predicted GO |
CC | GO:0031090 | organelle membrane | IEP | Predicted GO |
CC | GO:0031966 | mitochondrial membrane | IEP | Predicted GO |
BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
CC | GO:0033176 | proton-transporting V-type ATPase complex | IEP | Predicted GO |
CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Predicted GO |
BP | GO:0034220 | ion transmembrane transport | IEP | Predicted GO |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
MF | GO:0042625 | ATPase coupled ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0042816 | vitamin B6 metabolic process | IEP | Predicted GO |
BP | GO:0042819 | vitamin B6 biosynthetic process | IEP | Predicted GO |
BP | GO:0042822 | pyridoxal phosphate metabolic process | IEP | Predicted GO |
BP | GO:0042823 | pyridoxal phosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0043085 | positive regulation of catalytic activity | IEP | Predicted GO |
BP | GO:0044093 | positive regulation of molecular function | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044429 | mitochondrial part | IEP | Predicted GO |
CC | GO:0044437 | vacuolar part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044455 | mitochondrial membrane part | IEP | Predicted GO |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Predicted GO |
CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | Predicted GO |
CC | GO:0045275 | respiratory chain complex III | IEP | Predicted GO |
BP | GO:0046184 | aldehyde biosynthetic process | IEP | Predicted GO |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Predicted GO |
MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Predicted GO |
BP | GO:0051604 | protein maturation | IEP | Predicted GO |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Predicted GO |
CC | GO:0070069 | cytochrome complex | IEP | Predicted GO |
BP | GO:0090662 | ATP hydrolysis coupled transmembrane transport | IEP | Predicted GO |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Predicted GO |
BP | GO:0098655 | cation transmembrane transport | IEP | Predicted GO |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Predicted GO |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Predicted GO |
CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
CC | GO:0098798 | mitochondrial protein complex | IEP | Predicted GO |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Predicted GO |
CC | GO:0098803 | respiratory chain complex | IEP | Predicted GO |
BP | GO:0099131 | ATP hydrolysis coupled ion transmembrane transport | IEP | Predicted GO |
BP | GO:0099132 | ATP hydrolysis coupled cation transmembrane transport | IEP | Predicted GO |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Predicted GO |
CC | GO:1902494 | catalytic complex | IEP | Predicted GO |
BP | GO:1902600 | proton transmembrane transport | IEP | Predicted GO |
CC | GO:1990204 | oxidoreductase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002671 | Ribosomal_L22e | 20 | 129 |
No external refs found! |