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  5. PSME_00040944-RA

PSME_00040944-RA


Description : (at3g04030 : 275.0) Homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-related protein 1 (TAIR:AT5G18240.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 550.0) & (original description: no original description)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00040944-RA
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
405399 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
AC234155.1_FG002 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
At1g32240 No alias Probable transcription factor KAN2... 0.03 Orthogroups_2024-Update
At2g20400 No alias myb-like HTH transcriptional regulator family protein... 0.03 Orthogroups_2024-Update
Bradi3g36710 No alias Homeodomain-like superfamily protein 0.01 Orthogroups_2024-Update
Brara.A03315.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Brara.G02474.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Brara.I01162.1 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
Brara.J02547.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G069525 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G090230 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G106185 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G162409 No alias phosphate starvation response 1 0.02 Orthogroups_2024-Update
GRMZM2G175827 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G113000 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.12G089100 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G068930.39 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G047920.4 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
HORVU5Hr1G060310.22 No alias KANADI-type transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G107670.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
HORVU7Hr1G107680.10 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
LOC_Os12g01490 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_100658g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10251997g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_181986g0010 No alias (at3g04030 : 271.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
MA_335624g0020 No alias (at4g28610 : 125.0) Similar to phosphate starvation... 0.05 Orthogroups_2024-Update
PSME_00007589-RA No alias (at2g40260 : 115.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00038752-RA No alias (at5g16560 : 149.0) Encodes a KANADI protein (KAN) that... 0.03 Orthogroups_2024-Update
Potri.001G314800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.004G082400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G185666 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s55_182V6 No alias T3G21.3; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.3G199300.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Seita.3G373000.1 No alias KANADI-type transcription factor & transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Seita.8G019800.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Sobic.002G121600.1 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
Solyc06g066180 No alias Myb family transcription factor family protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc10g076460 No alias MYB-like transcription factor family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc11g011770 No alias Myb family transcription factor-like protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 229 275
IPR001005 SANT/Myb 130 181
No external refs found!