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  5. PSME_00045308-RA

PSME_00045308-RA


Description : (p28002|comt1_medsa : 243.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (at1g77520 : 235.0) O-methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77530.1); Has 3423 Blast hits to 3419 proteins in 583 species: Archae - 1; Bacteria - 980; Metazoa - 105; Fungi - 665; Plants - 1557; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 470.0) & (original description: no original description)


Gene families : OG_42_0000016 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00045308-RA
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
413501 No alias O-methyltransferase 1 0.02 Orthogroups_2024-Update
438615 No alias O-methyltransferase 1 0.03 Orthogroups_2024-Update
83100 No alias O-methyltransferase 1 0.03 Orthogroups_2024-Update
At1g21120 No alias O-methyltransferase family protein [Source:TAIR;Acc:AT1G21120] 0.04 Orthogroups_2024-Update
At1g33030 No alias At1g33030 [Source:UniProtKB/TrEMBL;Acc:Q9MAP0] 0.03 Orthogroups_2024-Update
At1g76790 No alias Indole glucosinolate O-methyltransferase 5... 0.03 Orthogroups_2024-Update
At3g53140 No alias AT3g53140/T4D2_70 [Source:UniProtKB/TrEMBL;Acc:Q9SCP7] 0.02 Orthogroups_2024-Update
Bradi2g50111 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
Bradi3g16530 No alias O-methyltransferase 1 0.06 Orthogroups_2024-Update
Bradi3g55890 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Brara.F01513.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Brara.G01120.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Brara.G02144.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Brara.G02172.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Brara.G03470.1 No alias EC_2.1 transferase transferring one-carbon group 0.05 Orthogroups_2024-Update
Brara.H00617.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Brara.H01339.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Brara.H02296.1 No alias EC_2.1 transferase transferring one-carbon group 0.05 Orthogroups_2024-Update
Brara.H02297.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Brara.J00896.1 No alias caffeic acid O-methyltransferase *(COMT) & EC_2.1... 0.03 Orthogroups_2024-Update
Brara.J00898.1 No alias caffeic acid O-methyltransferase *(COMT) & EC_2.1... 0.04 Orthogroups_2024-Update
GRMZM2G082007 No alias O-methyltransferase family protein 0.04 Orthogroups_2024-Update
GRMZM2G140996 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Glyma.02G233100 No alias O-methyltransferase 1 0.03 Orthogroups_2024-Update
Glyma.06G137300 No alias O-methyltransferase 1 0.03 Orthogroups_2024-Update
Glyma.08G248000 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Glyma.09G094600 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Glyma.09G281900 No alias O-methyltransferase 1 0.03 Orthogroups_2024-Update
Glyma.10G176600 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Glyma.14G200800 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
Glyma.14G201000 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
Glyma.14G201100 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Glyma.18G267900 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Glyma.18G269600 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
Glyma.20G213500 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G001570.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
HORVU4Hr1G085680.2 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
HORVU6Hr1G003160.2 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
HORVU6Hr1G090510.2 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
HORVU7Hr1G117890.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
HORVU7Hr1G119480.2 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
LOC_Os04g09654 No alias O-methyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g27880 No alias O-methyltransferase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g25490 No alias O-methyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10432099g0010 No alias (q8w013|comt1_catro : 381.0) Caffeic acid... 0.04 Orthogroups_2024-Update
MA_10432987g0020 No alias (p28002|comt1_medsa : 228.0) Caffeic acid... 0.03 Orthogroups_2024-Update
MA_1665780g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_5226589g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_76956g0010 No alias (q9fqy8|comt1_capan : 399.0) Caffeic acid... 0.03 Orthogroups_2024-Update
MA_84582g0010 No alias (q8w013|comt1_catro : 181.0) Caffeic acid... 0.04 Orthogroups_2024-Update
MA_86945g0010 No alias (at5g54160 : 94.7) A caffeic acid/5-hydroxyferulic acid... 0.03 Orthogroups_2024-Update
PSME_00009783-RA No alias (q9fqy8|comt1_capan : 443.0) Caffeic acid... 0.02 Orthogroups_2024-Update
PSME_00018014-RA No alias (q9fqy8|comt1_capan : 378.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00018015-RA No alias (q9fqy8|comt1_capan : 332.0) Caffeic acid... 0.03 Orthogroups_2024-Update
PSME_00030764-RA No alias (q8w013|comt1_catro : 213.0) Caffeic acid... 0.05 Orthogroups_2024-Update
PSME_00032996-RA No alias (q8w013|comt1_catro : 410.0) Caffeic acid... 0.03 Orthogroups_2024-Update
PSME_00041946-RA No alias (o82054|comt1_sacof : 182.0) Caffeic acid... 0.02 Orthogroups_2024-Update
PSME_00043368-RA No alias (q06509|comt1_maize : 134.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00050591-RA No alias (q8w013|comt1_catro : 191.0) Caffeic acid... 0.03 Orthogroups_2024-Update
PSME_00051407-RA No alias (p28002|comt1_medsa : 208.0) Caffeic acid... 0.02 Orthogroups_2024-Update
PSME_00052715-RA No alias (p28002|comt1_medsa : 235.0) Caffeic acid... 0.05 Orthogroups_2024-Update
PSME_00053129-RA No alias (q8w013|comt1_catro : 265.0) Caffeic acid... 0.04 Orthogroups_2024-Update
Potri.001G451100 No alias O-methyltransferase 1 0.07 Orthogroups_2024-Update
Potri.002G180600 No alias O-methyltransferase 1 0.03 Orthogroups_2024-Update
Potri.005G183800 No alias O-methyltransferase 1 0.02 Orthogroups_2024-Update
Potri.011G150500 No alias O-methyltransferase 1 0.05 Orthogroups_2024-Update
Potri.012G006400 No alias O-methyltransferase 1 0.03 Orthogroups_2024-Update
Potri.013G122200 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Potri.013G143800 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
Potri.014G106600 No alias O-methyltransferase 1 0.03 Orthogroups_2024-Update
Seita.1G045400.1 No alias EC_2.1 transferase transferring one-carbon group 0.06 Orthogroups_2024-Update
Seita.3G179100.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Seita.5G331100.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Seita.6G055900.1 No alias caffeic acid O-methyltransferase *(COMT) & EC_2.1... 0.02 Orthogroups_2024-Update
Seita.7G073700.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Sobic.001G346800.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Sobic.007G047300.1 No alias caffeic acid O-methyltransferase *(COMT) & EC_2.1... 0.05 Orthogroups_2024-Update
Sobic.007G058400.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Sobic.007G058800.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Sobic.007G059100.1 No alias EC_2.1 transferase transferring one-carbon group 0.04 Orthogroups_2024-Update
Sobic.007G170500.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Sobic.008G061401.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Sobic.010G230800.1 No alias EC_2.1 transferase transferring one-carbon group 0.04 Orthogroups_2024-Update
Sobic.010G231000.2 No alias EC_2.1 transferase transferring one-carbon group 0.04 Orthogroups_2024-Update
Solyc10g047520 No alias LOW QUALITY:O-methyltransferase (AHRD V3.3 *-* Q6VMV7_MENPI) 0.03 Orthogroups_2024-Update
Solyc12g041950 No alias O-methyltransferase (AHRD V3.3 *-* G4XGX0_VITVI) 0.05 Orthogroups_2024-Update
Solyc12g041960 No alias O-methyltransferase (AHRD V3.3 *** A0A1B4Z3W3_9ROSA) 0.03 Orthogroups_2024-Update
Sopen01g053940 No alias O-methyltransferase 0.02 Orthogroups_2024-Update
Sopen06g020340 No alias O-methyltransferase 0.03 Orthogroups_2024-Update
Sopen06g034820 No alias O-methyltransferase 0.03 Orthogroups_2024-Update
Sopen06g034830 No alias O-methyltransferase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:0015939 pantothenate metabolic process IEP Predicted GO
BP GO:0015940 pantothenate biosynthetic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001077 O_MeTrfase_2 158 368
IPR012967 Plant_MeTrfase_dimerisation 76 126
No external refs found!