Description : no hits & (original description: no original description)
Gene families : OG_42_0002853 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002853_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00048165-RA | |
Cluster | HCCA clusters: Cluster_45 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
227173 | No alias | Ribosomal protein S30 family protein | 0.07 | Orthogroups_2024-Update | |
At2g19750 | No alias | 40S ribosomal protein S30... | 0.05 | Orthogroups_2024-Update | |
At4g29390 | No alias | 40S ribosomal protein S30... | 0.06 | Orthogroups_2024-Update | |
Bradi1g48060 | No alias | Ribosomal protein S30 family protein | 0.02 | Orthogroups_2024-Update | |
Brara.A00791.1 | No alias | component *(eS30) of small ribosomal-subunit (SSU) proteome | 0.11 | Orthogroups_2024-Update | |
Brara.C01230.1 | No alias | component *(eS30) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Brara.I04721.1 | No alias | component *(eS30) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Brara.J01095.1 | No alias | component *(eS30) of small ribosomal-subunit (SSU) proteome | 0.02 | Orthogroups_2024-Update | |
Cre16.g666301 | No alias | Ribosomal protein S30 family protein | 0.18 | Orthogroups_2024-Update | |
GRMZM2G054012 | No alias | Ribosomal protein S30 family protein | 0.08 | Orthogroups_2024-Update | |
Glyma.01G209400 | No alias | Ribosomal protein S30 family protein | 0.02 | Orthogroups_2024-Update | |
HORVU7Hr1G027760.1 | No alias | component *(eS30) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
LOC_Os06g07580 | No alias | expressed protein | 0.04 | Orthogroups_2024-Update | |
MA_10432727g0010 | No alias | (at5g56670 : 97.4) Ribosomal protein S30 family protein;... | 0.05 | Orthogroups_2024-Update | |
Mp2g24290.1 | No alias | component RPS30 of SSU proteome | 0.04 | Orthogroups_2024-Update | |
Mp8g09080.1 | No alias | component RPS30 of SSU proteome | 0.02 | Orthogroups_2024-Update | |
Potri.012G086600 | No alias | Ribosomal protein S30 family protein | 0.07 | Orthogroups_2024-Update | |
Potri.014G147200 | No alias | Ribosomal protein S30 family protein | 0.06 | Orthogroups_2024-Update | |
Potri.015G084700 | No alias | Ribosomal protein S30 family protein | 0.07 | Orthogroups_2024-Update | |
Pp1s22_155V6 | No alias | 40s ribosomal protein s30 | 0.14 | Orthogroups_2024-Update | |
Pp1s22_171V6 | No alias | 40s ribosomal protein s30 | 0.11 | Orthogroups_2024-Update | |
Pp1s283_53V6 | No alias | 40s ribosomal protein s30 | 0.17 | Orthogroups_2024-Update | |
Pp1s97_259V6 | No alias | 40s ribosomal protein s30 | 0.14 | Orthogroups_2024-Update | |
Solyc08g076340 | No alias | 40S ribosomal protein S30 (AHRD V3.3 *** W9QWZ6_9ROSA) | 0.13 | Orthogroups_2024-Update | |
Solyc12g008700 | No alias | peroxisomal ABC transporter 1 (AHRD V3.3 --* AT4G39850.4) | 0.14 | Orthogroups_2024-Update | |
evm.model.tig00001003.33 | No alias | no hits & (original description: no original description) | 0.09 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Predicted GO |
MF | GO:0004579 | dolichyl-diphosphooligosaccharide-protein glycotransferase activity | IEP | Predicted GO |
CC | GO:0005739 | mitochondrion | IEP | Predicted GO |
CC | GO:0005747 | mitochondrial respiratory chain complex I | IEP | Predicted GO |
CC | GO:0005787 | signal peptidase complex | IEP | Predicted GO |
BP | GO:0006066 | alcohol metabolic process | IEP | Predicted GO |
BP | GO:0006400 | tRNA modification | IEP | Predicted GO |
BP | GO:0006457 | protein folding | IEP | Predicted GO |
BP | GO:0006465 | signal peptide processing | IEP | Predicted GO |
BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | Predicted GO |
BP | GO:0006801 | superoxide metabolic process | IEP | Predicted GO |
MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | Predicted GO |
CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Predicted GO |
CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
BP | GO:0015988 | energy coupled proton transmembrane transport, against electrochemical gradient | IEP | Predicted GO |
BP | GO:0015991 | ATP hydrolysis coupled proton transport | IEP | Predicted GO |
CC | GO:0016272 | prefoldin complex | IEP | Predicted GO |
CC | GO:0016469 | proton-transporting two-sector ATPase complex | IEP | Predicted GO |
CC | GO:0016471 | vacuolar proton-transporting V-type ATPase complex | IEP | Predicted GO |
BP | GO:0016485 | protein processing | IEP | Predicted GO |
BP | GO:0019751 | polyol metabolic process | IEP | Predicted GO |
CC | GO:0030964 | NADH dehydrogenase complex | IEP | Predicted GO |
CC | GO:0033176 | proton-transporting V-type ATPase complex | IEP | Predicted GO |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Predicted GO |
BP | GO:0034227 | tRNA thio-modification | IEP | Predicted GO |
BP | GO:0034311 | diol metabolic process | IEP | Predicted GO |
BP | GO:0034312 | diol biosynthetic process | IEP | Predicted GO |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044425 | membrane part | IEP | Predicted GO |
CC | GO:0044432 | endoplasmic reticulum part | IEP | Predicted GO |
CC | GO:0044437 | vacuolar part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044455 | mitochondrial membrane part | IEP | Predicted GO |
CC | GO:0045271 | respiratory chain complex I | IEP | Predicted GO |
BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | Predicted GO |
BP | GO:0046165 | alcohol biosynthetic process | IEP | Predicted GO |
BP | GO:0046173 | polyol biosynthetic process | IEP | Predicted GO |
BP | GO:0051604 | protein maturation | IEP | Predicted GO |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Predicted GO |
BP | GO:0090662 | ATP hydrolysis coupled transmembrane transport | IEP | Predicted GO |
CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
CC | GO:0098798 | mitochondrial protein complex | IEP | Predicted GO |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Predicted GO |
CC | GO:0098803 | respiratory chain complex | IEP | Predicted GO |
BP | GO:0099131 | ATP hydrolysis coupled ion transmembrane transport | IEP | Predicted GO |
BP | GO:0099132 | ATP hydrolysis coupled cation transmembrane transport | IEP | Predicted GO |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Predicted GO |
CC | GO:1902494 | catalytic complex | IEP | Predicted GO |
BP | GO:1902600 | proton transmembrane transport | IEP | Predicted GO |
CC | GO:1905368 | peptidase complex | IEP | Predicted GO |
CC | GO:1990204 | oxidoreductase complex | IEP | Predicted GO |
CC | GO:1990234 | transferase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006846 | Ribosomal_S30 | 3 | 55 |
No external refs found! |