1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00048781-RA

PSME_00048781-RA


Description : (at1g44820 : 575.0) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, aminoacylase activity; INVOLVED IN: metabolic process, cellular amino acid metabolic process; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44180.1); Has 5585 Blast hits to 5583 proteins in 1537 species: Archae - 130; Bacteria - 3721; Metazoa - 430; Fungi - 258; Plants - 102; Viruses - 2; Other Eukaryotes - 942 (source: NCBI BLink). & (reliability: 1150.0) & (original description: no original description)


Gene families : OG_42_0002235 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002235_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00048781-RA
Cluster HCCA clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
Pp1s42_262V6 No alias F20D10.340; aminoacylase, putative / N-acyl-L-amino-acid... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011650 Peptidase_M20_dimer 215 320
IPR002933 Peptidase_M20 96 428
No external refs found!