1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00052825-RA

PSME_00052825-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000207 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00052825-RA
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
A4A49_14888 No alias protein c2-domain aba-related 4 0.03 Orthogroups_2024-Update
At1g70810 No alias Protein C2-DOMAIN ABA-RELATED 7... 0.03 Orthogroups_2024-Update
At5g37740 No alias Calcium-dependent lipid-binding (CaLB domain) family... 0.03 Orthogroups_2024-Update
Bradi3g56560 No alias Calcium-dependent ARF-type GTPase activating protein family 0.05 Orthogroups_2024-Update
Brara.G02427.1 No alias abscisic acid receptor recruitment factor *(CAR) 0.02 Orthogroups_2024-Update
Brara.G02645.1 No alias abscisic acid receptor recruitment factor *(CAR) 0.03 Orthogroups_2024-Update
Brara.H00344.1 No alias abscisic acid receptor recruitment factor *(CAR) 0.03 Orthogroups_2024-Update
Glyma.11G154100 No alias Calcium-dependent ARF-type GTPase activating protein family 0.03 Orthogroups_2024-Update
Glyma.15G236900 No alias Calcium-dependent ARF-type GTPase activating protein family 0.03 Orthogroups_2024-Update
LOC_Os02g22130 No alias expressed protein 0.02 Orthogroups_2024-Update
PSME_00052609-RA No alias (at4g21160 : 117.0) ADP-ribosylation factor... 0.03 Orthogroups_2024-Update
Potri.003G198300 No alias Calcium-dependent ARF-type GTPase activating protein family 0.03 Orthogroups_2024-Update
Solyc03g118720 No alias C2-domain ABA-related family protein 0.02 Orthogroups_2024-Update
Solyc04g007800 No alias Calcium-dependent lipid-binding (CaLB domain) family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004146 dihydrofolate reductase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046653 tetrahydrofolate metabolic process IEP Predicted GO
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 7 103
No external refs found!