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  5. Bradi1g42440

Bradi1g42440


Description : ROOT HAIR DEFECTIVE6


Gene families : OG_42_0000539 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000539_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g42440
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
413232 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Orthogroups_2024-Update
A4A49_31288 No alias transcription factor bhlh83 0.03 Orthogroups_2024-Update
At2g14760 No alias Basic helix-loop-helix (BHLH) DNA-binding superfamily... 0.03 Orthogroups_2024-Update
Glyma.02G246400 No alias RHD SIX-LIKE 1 0.02 Orthogroups_2024-Update
Glyma.18G039200 No alias RHD SIX-LIKE 1 0.03 Orthogroups_2024-Update
Seita.1G293000.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Seita.5G075100.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Sopen04g031550 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 151 196
No external refs found!