Bradi1g54510


Description : coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative


Gene families : OG_42_0003878 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003878_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g54510
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
268757 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.05 Orthogroups_2024-Update
Cre06.g310750 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.07 Orthogroups_2024-Update
Glyma.04G013200 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.03 Orthogroups_2024-Update
HORVU1Hr1G042050.17 No alias subunit gamma of cargo adaptor F-subcomplex 0.05 Orthogroups_2024-Update
HORVU4Hr1G065380.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.05 Orthogroups_2024-Update
Kfl00637_0070 kfl00637_0070_v1.1 (at4g34450 : 1191.0) coatomer gamma-2 subunit, putative... 0.02 Orthogroups_2024-Update
LOC_Os07g10150 No alias coatomer subunit gamma-2, putative, expressed 0.03 Orthogroups_2024-Update
Mp1g05250.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.03 Orthogroups_2024-Update
PSME_00017732-RA No alias (at4g34450 : 1333.0) coatomer gamma-2 subunit, putative... 0.03 Orthogroups_2024-Update
Pp1s15_298V6 No alias coatomer protein gamma-subunit 0.06 Orthogroups_2024-Update
Pp1s276_96V6 No alias coatomer protein gamma-subunit 0.05 Orthogroups_2024-Update
Pp1s41_154V6 No alias coatomer protein gamma-subunit 0.04 Orthogroups_2024-Update
Seita.2G076200.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.1 Orthogroups_2024-Update
Seita.9G479500.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.06 Orthogroups_2024-Update
Sobic.001G445500.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.05 Orthogroups_2024-Update
Sobic.002G070600.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.1 Orthogroups_2024-Update
Solyc01g109540 No alias Coatomer subunit gamma (AHRD V3.3 *** K4B3G7_SOLLC) 0.04 Orthogroups_2024-Update
Sopen01g051730 No alias Adaptin N terminal region 0.05 Orthogroups_2024-Update
evm.model.contig_3427.8 No alias (at4g34450 : 528.0) coatomer gamma-2 subunit, putative /... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
CC GO:0030117 membrane coat IEA InterProScan predictions
CC GO:0030126 COPI vesicle coat IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
CC GO:0000139 Golgi membrane IEP Predicted GO
CC GO:0000502 proteasome complex IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0030173 integral component of Golgi membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031228 intrinsic component of Golgi membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR032154 Coatomer_g_Cpla 771 885
IPR002553 Clathrin/coatomer_adapt-like_N 31 542
IPR013040 Coatomer_gsu_app_Ig-like_dom 623 768
No external refs found!