Description : RNA polymerase II transcription mediators
Gene families : OG_42_0006786 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006786_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi2g00620 | |
Cluster | HCCA clusters: Cluster_207 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At5g20170 | No alias | Mediator of RNA polymerase II transcription subunit 17... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEA | InterProScan predictions |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEA | InterProScan predictions |
CC | GO:0016592 | mediator complex | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0004177 | aminopeptidase activity | IEP | Predicted GO |
MF | GO:0004665 | prephenate dehydrogenase (NADP+) activity | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
BP | GO:0006338 | chromatin remodeling | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006570 | tyrosine metabolic process | IEP | Predicted GO |
BP | GO:0006571 | tyrosine biosynthetic process | IEP | Predicted GO |
BP | GO:0008104 | protein localization | IEP | Predicted GO |
MF | GO:0008977 | prephenate dehydrogenase (NAD+) activity | IEP | Predicted GO |
MF | GO:0008987 | quinolinate synthetase A activity | IEP | Predicted GO |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Predicted GO |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predicted GO |
BP | GO:0009435 | NAD biosynthetic process | IEP | Predicted GO |
BP | GO:0015031 | protein transport | IEP | Predicted GO |
BP | GO:0015833 | peptide transport | IEP | Predicted GO |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Predicted GO |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Predicted GO |
MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
BP | GO:0019674 | NAD metabolic process | IEP | Predicted GO |
CC | GO:0030117 | membrane coat | IEP | Predicted GO |
CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | Predicted GO |
MF | GO:0031491 | nucleosome binding | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
BP | GO:0042886 | amide transport | IEP | Predicted GO |
BP | GO:0043044 | ATP-dependent chromatin remodeling | IEP | Predicted GO |
BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
CC | GO:0044599 | AP-5 adaptor complex | IEP | Predicted GO |
MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Predicted GO |
BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR019313 | Mediator_Med17 | 77 | 403 |
No external refs found! |