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  5. Bradi2g03180

Bradi2g03180


Description : proteolysis 6


Gene families : OG_42_0002846 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002846_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g03180
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G438938 No alias proteolysis 6 0.03 Orthogroups_2024-Update
Glyma.07G132300 No alias proteolysis 6 0.08 Orthogroups_2024-Update
HORVU3Hr1G013300.5 No alias type-I-residues E3 ubiquitin ligase *(PRT6) 0.03 Orthogroups_2024-Update
Kfl00338_0040 kfl00338_0040_v1.1 (at5g02310 : 216.0) Encodes PROTEOLYSIS6 (PRT6), a... 0.02 Orthogroups_2024-Update
Kfl00338_0050 kfl00338_0050_v1.1 (at5g02310 : 149.0) Encodes PROTEOLYSIS6 (PRT6), a... 0.02 Orthogroups_2024-Update
Mp7g16320.1 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.02 Orthogroups_2024-Update
PSME_00008232-RA No alias (at5g02310 : 269.0) Encodes PROTEOLYSIS6 (PRT6), a... 0.02 Orthogroups_2024-Update
Pp1s356_43V6 No alias ubiquitin ligase e3 0.04 Orthogroups_2024-Update
Pp1s67_180V6 No alias ubiquitin ligase e3 0.04 Orthogroups_2024-Update
Seita.5G102700.1 No alias type-I-residues E3 ubiquitin ligase *(PRT6) 0.07 Orthogroups_2024-Update
Sobic.003G072200.1 No alias type-I-residues E3 ubiquitin ligase *(PRT6) 0.04 Orthogroups_2024-Update
Solyc09g010830 No alias E3 ubiquitin-protein ligase (AHRD V3.3 *** W9SG42_9ROSA) 0.04 Orthogroups_2024-Update
Solyc10g084760 No alias E3 ubiquitin-protein ligase (AHRD V3.3 *** W9SG42_9ROSA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003126 Znf_UBR 128 194
No external refs found!