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  5. Bradi2g12530

Bradi2g12530


Description : binding


Gene families : OG_42_0001964 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g12530
Cluster HCCA clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
416323 No alias binding 0.02 Orthogroups_2024-Update
At3g06670 No alias Binding protein [Source:UniProtKB/TrEMBL;Acc:F4JC31] 0.03 Orthogroups_2024-Update
Glyma.07G241500 No alias binding 0.05 Orthogroups_2024-Update
Glyma.15G143000 No alias binding 0.04 Orthogroups_2024-Update
Glyma.17G032400 No alias binding 0.04 Orthogroups_2024-Update
HORVU3Hr1G044880.3 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.05 Orthogroups_2024-Update
Pp1s35_39V6 No alias F3E22.19; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s391_25V6 No alias Hypothetical protein C216.01c in chromosome II... 0.02 Orthogroups_2024-Update
Pp1s60_97V6 No alias F3E22.19; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.5G158700.1 No alias regulatory component *(PP4R3) of PP4 phosphatase complex... 0.03 Orthogroups_2024-Update
Sopen01g026260 No alias Component of IIS longevity pathway SMK-1 0.03 Orthogroups_2024-Update
Sopen12g034000 No alias Component of IIS longevity pathway SMK-1 0.04 Orthogroups_2024-Update
evm.model.tig00001408.7 No alias (at3g06670 : 149.0) binding; FUNCTIONS IN: binding;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004484 mRNA guanylyltransferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006370 7-methylguanosine mRNA capping IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006887 DUF625 202 390
No external refs found!