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  5. Bradi2g28007

Bradi2g28007


Description : target of rapamycin


Gene families : OG_42_0004193 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g28007
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
At1g50030 No alias Serine/threonine-protein kinase TOR... 0.03 Orthogroups_2024-Update
Glyma.01G241300 No alias target of rapamycin 0.05 Orthogroups_2024-Update
Glyma.11G002600 No alias target of rapamycin 0.07 Orthogroups_2024-Update
Kfl00356_0080 kfl00356_0080_v1.1 (at1g50030 : 2690.0) Related to TOR proteins from yeast... 0.03 Orthogroups_2024-Update
MA_10428789g0010 No alias (at1g50030 : 335.0) Related to TOR proteins from yeast... 0.05 Orthogroups_2024-Update
PSME_00000567-RA No alias (at1g50030 : 1101.0) Related to TOR proteins from yeast... 0.05 Orthogroups_2024-Update
Potri.009G084500 No alias target of rapamycin 0.03 Orthogroups_2024-Update
Pp1s448_6V6 No alias target of rapamycin 0.07 Orthogroups_2024-Update
Seita.3G273900.1 No alias phosphatidylinositol kinase component *(TOR) of TORC complex 0.04 Orthogroups_2024-Update
Sobic.009G109200.1 No alias phosphatidylinositol kinase component *(TOR) of TORC complex 0.11 Orthogroups_2024-Update
Solyc01g106770 No alias Serine/threonine-protein kinase (AHRD V3.3 *** A0A0K0XR78_TOBAC) 0.06 Orthogroups_2024-Update
Sopen01g049080 No alias FAT domain 0.03 Orthogroups_2024-Update
evm.model.contig_2240.1 No alias (at1g50030 : 150.0) Related to TOR proteins from yeast... 0.03 Orthogroups_2024-Update
evm.model.contig_798.1 No alias (at1g50030 : 714.0) Related to TOR proteins from yeast... 0.02 Orthogroups_2024-Update
evm.model.tig00020710.88 No alias (at1g50030 : 1769.0) Related to TOR proteins from yeast... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0044877 protein-containing complex binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000403 PI3/4_kinase_cat_dom 2077 2325
IPR003152 FATC_dom 2436 2466
IPR009076 FRB_dom 1910 2008
IPR003151 PIK-rel_kinase_FAT 1437 1803
IPR024585 DUF3385_TOR 756 925
No external refs found!