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  5. Bradi2g36057

Bradi2g36057


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0009404 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g36057
Cluster HCCA clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Brara.F00895.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 51 97
IPR002885 Pentatricopeptide_repeat 116 149
IPR002885 Pentatricopeptide_repeat 158 184
No external refs found!