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  5. Bradi2g36237

Bradi2g36237


Description : Fibronectin type III domain-containing protein


Gene families : OG_42_0001253 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001253_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g36237
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
At3g24440 No alias VIN3-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHF5] 0.02 Orthogroups_2024-Update
Brara.H01416.1 No alias PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.03 Orthogroups_2024-Update
GRMZM2G425774 No alias vernalization5/VIN3-like 0.03 Orthogroups_2024-Update
Glyma.05G232400 No alias Fibronectin type III domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.13G097000 No alias vernalization5/VIN3-like 0.02 Orthogroups_2024-Update
MA_103156g0010 No alias (at4g30200 : 345.0) Encodes a protein with similarity to... 0.01 Orthogroups_2024-Update
Seita.3G347300.1 No alias PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.04 Orthogroups_2024-Update
Solyc04g076400 No alias Protein VERNALIZATION INSENSITIVE 3 (AHRD V3.3 *** W9SPV3_9ROSA) 0.02 Orthogroups_2024-Update
Solyc05g018390 No alias Vernalization insensitive 3-like protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR032881 Oberon_PHD 53 171
IPR003961 FN3_dom 253 333
No external refs found!