Description : CASC3/Barentsz eIF4AIII binding
Gene families : OG_42_0002637 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002637_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi2g42540 | |
Cluster | HCCA clusters: Cluster_149 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Mp8g03760.1 | No alias | component CASC3 of RNA quality control Exon Junction complex | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEP | Predicted GO |
MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
CC | GO:0005669 | transcription factor TFIID complex | IEP | Predicted GO |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Predicted GO |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
CC | GO:0016592 | mediator complex | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Predicted GO |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Predicted GO |
MF | GO:1990380 | Lys48-specific deubiquitinase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR018545 | Btz_dom | 134 | 232 |
No external refs found! |