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  5. Bradi2g61842

Bradi2g61842


Description : Function unknown


Gene families : OG_42_0001470 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001470_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g61842
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
A4A49_17288 No alias hypothetical protein 0.02 Orthogroups_2024-Update
At2g19390 No alias Expressed protein [Source:UniProtKB/TrEMBL;Acc:O64572] 0.03 Orthogroups_2024-Update
GRMZM2G013100 No alias Function unknown 0.02 Orthogroups_2024-Update
GRMZM2G142456 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.12G088600 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.13G106700 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.15G172400 No alias Function unknown 0.06 Orthogroups_2024-Update
Glyma.17G052600 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.20G110300 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU3Hr1G113130.1 No alias component *(ADA3) of SAGA transcription co-activator complex 0.05 Orthogroups_2024-Update
MA_107341g0010 No alias (at4g29790 : 417.0) unknown protein; BEST Arabidopsis... 0.05 Orthogroups_2024-Update
PSME_00024678-RA No alias (at4g29790 : 534.0) unknown protein; BEST Arabidopsis... 0.06 Orthogroups_2024-Update
Potri.008G020600 No alias Function unknown 0.02 Orthogroups_2024-Update
Pp1s319_41V6 No alias hypothetical protein similar to Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Seita.3G069600.1 No alias component *(ADA3) of SAGA transcription co-activator complex 0.07 Orthogroups_2024-Update
Seita.3G278300.1 No alias component *(ADA3) of SAGA transcription co-activator complex 0.07 Orthogroups_2024-Update
Sobic.003G422500.1 No alias component *(ADA3) of SAGA transcription co-activator complex 0.05 Orthogroups_2024-Update
Sobic.009G005500.1 No alias component *(ADA3) of SAGA transcription co-activator complex 0.06 Orthogroups_2024-Update
Solyc11g006960 No alias Serine/arginine repetitive matrix protein 2 isoform 1... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!