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Description : Tudor/PWWP/MBT superfamily protein
Gene families : OG_42_0001312 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001312_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi2g62680 | |
| Cluster | HCCA clusters: Cluster_225 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At3g09670 | No alias | Tudor/PWWP/MBT superfamily protein... | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G095905 | No alias | Tudor/PWWP/MBT superfamily protein | 0.06 | Orthogroups_2024-Update | |
| Glyma.10G116800 | No alias | Tudor/PWWP/MBT superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.20G198402 | No alias | Tudor/PWWP/MBT superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G117730.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Potri.008G044600 | No alias | Tudor/PWWP/MBT superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.010G216900 | No alias | Tudor/PWWP/MBT superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Sobic.009G166100.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0003712 | transcription coregulator activity | IEP | Predicted GO |
| MF | GO:0003729 | mRNA binding | IEP | Predicted GO |
| MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
| MF | GO:0005096 | GTPase activator activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| CC | GO:0005634 | nucleus | IEP | Predicted GO |
| CC | GO:0005685 | U1 snRNP | IEP | Predicted GO |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
| BP | GO:0006376 | mRNA splice site selection | IEP | Predicted GO |
| MF | GO:0008047 | enzyme activator activity | IEP | Predicted GO |
| CC | GO:0016592 | mediator complex | IEP | Predicted GO |
| MF | GO:0016759 | cellulose synthase activity | IEP | Predicted GO |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Predicted GO |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predicted GO |
| BP | GO:0030243 | cellulose metabolic process | IEP | Predicted GO |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Predicted GO |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predicted GO |
| MF | GO:0030695 | GTPase regulator activity | IEP | Predicted GO |
| MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0044428 | nuclear part | IEP | Predicted GO |
| MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predicted GO |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predicted GO |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000313 | PWWP_dom | 79 | 142 |
| No external refs found! |