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  5. Bradi2g62697

Bradi2g62697


Description : DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain


Gene families : OG_42_0001670 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g62697
Cluster HCCA clusters: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
Brara.F01851.1 No alias E3 SUMO ubiquitin ligase *(SIZ1) 0.02 Orthogroups_2024-Update
GRMZM2G155123 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.03 Orthogroups_2024-Update
Glyma.12G071300 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.04 Orthogroups_2024-Update
Glyma.13G328100 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.04 Orthogroups_2024-Update
PSME_00034441-RA No alias (at3g02090 : 80.5) MPPBETA; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Potri.009G015000 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.04 Orthogroups_2024-Update
Pp1s16_412V6 No alias MUF9.5; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.3G046500.1 No alias E3 SUMO ubiquitin ligase *(SIZ1) 0.03 Orthogroups_2024-Update
Sobic.009G026500.1 No alias E3 SUMO ubiquitin ligase *(SIZ1) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
MF GO:0008193 tRNA guanylyltransferase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004181 Znf_MIZ 432 480
IPR003034 SAP_dom 86 114
No external refs found!