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  5. Bradi3g02620

Bradi3g02620


Description : Small nuclear ribonucleoprotein family protein


Gene families : OG_42_0004050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g02620
Cluster HCCA clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
At4g30330 No alias At4g30330 [Source:UniProtKB/TrEMBL;Acc:Q8LAK5] 0.04 Orthogroups_2024-Update
Mp5g07450.1 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.03 Orthogroups_2024-Update
PSME_00033648-RA No alias (at4g30330 : 159.0) Small nuclear ribonucleoprotein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 20 83
No external refs found!