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  5. Bradi3g15410

Bradi3g15410


Description : SET domain protein 2


Gene families : OG_42_0004784 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004784_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g15410
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
432361 No alias SET domain protein 2 0.04 Orthogroups_2024-Update
447947 No alias SET domain protein 2 0.04 Orthogroups_2024-Update
Cre17.g742700 No alias SET domain protein 2 0.03 Orthogroups_2024-Update
Glyma.06G301900 No alias SET domain protein 2 0.05 Orthogroups_2024-Update
Glyma.12G196800 No alias SET domain protein 2 0.11 Orthogroups_2024-Update
Glyma.13G305000 No alias SET domain protein 2 0.08 Orthogroups_2024-Update
Kfl00052_0360 kfl00052_0360_v1.1 (at4g15180 : 131.0) SET domain protein 2 (SDG2);... 0.03 Orthogroups_2024-Update
Kfl00289_0080 kfl00289_0080_v1.1 (at4g15180 : 615.0) SET domain protein 2 (SDG2);... 0.08 Orthogroups_2024-Update
MA_102811g0010 No alias (at4g15180 : 414.0) SET domain protein 2 (SDG2);... 0.09 Orthogroups_2024-Update
Mp2g06500.1 No alias class III/Trithorax histone methyltransferase component... 0.08 Orthogroups_2024-Update
PSME_00014211-RA No alias (at4g15180 : 988.0) SET domain protein 2 (SDG2);... 0.04 Orthogroups_2024-Update
Pp1s311_17V6 No alias set domain protein 0.06 Orthogroups_2024-Update
Seita.6G042300.1 No alias class-III histone methyltransferase *(Trx) 0.14 Orthogroups_2024-Update
Sobic.007G062800.1 No alias class-III histone methyltransferase *(Trx) 0.13 Orthogroups_2024-Update
Solyc07g052940 No alias Histone-lysine N-methyltransferase (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update
Sopen07g026490 No alias SET domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025640 DUF4339 899 943
IPR001214 SET_dom 1783 1850
No external refs found!