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  5. Bradi3g60610

Bradi3g60610


Description : ARM repeat superfamily protein


Gene families : OG_42_0005119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g60610
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
84835 No alias ARM repeat superfamily protein 0.06 Orthogroups_2024-Update
At5g15680 No alias ARM repeat superfamily protein... 0.03 Orthogroups_2024-Update
Glyma.19G037200 No alias ARM repeat superfamily protein 0.08 Orthogroups_2024-Update
Kfl00564_0040 kfl00564_0040_v1.1 (at5g15680 : 1628.0) ARM repeat superfamily protein;... 0.03 Orthogroups_2024-Update
Seita.1G378100.1 No alias scaffold component *(FRY) of RAM signalling pathway 0.11 Orthogroups_2024-Update
Sobic.004G357100.1 No alias scaffold component *(FRY) of RAM signalling pathway 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR029473 MOR2-PAG1_mid 602 1714
IPR025614 Cell_morpho_N 65 565
IPR025481 Cell_Morphogen_C 1739 2027
No external refs found!