1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi4g27157

Bradi4g27157


Description : RNA polymerase II transcription mediators


Gene families : OG_42_0004031 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004031_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g27157
Cluster HCCA clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
90823 No alias RNA polymerase II transcription mediators 0.04 Orthogroups_2024-Update
Cre03.g190550 No alias RNA polymerase II transcription mediators 0.03 Orthogroups_2024-Update
Glyma.19G245100 No alias RNA polymerase II transcription mediators 0.05 Orthogroups_2024-Update
HORVU5Hr1G053430.1 No alias component *(MED14) of tail module of MEDIATOR... 0.03 Orthogroups_2024-Update
Kfl00082_0190 kfl00082_0190_v1.1 (at3g04740 : 266.0) encodes a protein with similarities... 0.03 Orthogroups_2024-Update
Mp8g13300.1 No alias component MED14 of tail module of MEDIATOR transcription... 0.02 Orthogroups_2024-Update
Pp1s199_104V6 No alias cofactor required for sp1 transcriptional subunit 150kda 0.02 Orthogroups_2024-Update
Pp1s199_25V6 No alias cofactor required for sp1 transcriptional subunit 150kda 0.01 Orthogroups_2024-Update
Seita.2G162700.1 No alias component *(MED14) of tail module of MEDIATOR... 0.08 Orthogroups_2024-Update
Seita.6G114600.1 No alias component *(MED14) of tail module of MEDIATOR... 0.04 Orthogroups_2024-Update
Sobic.002G153700.1 No alias component *(MED14) of tail module of MEDIATOR... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEA InterProScan predictions
BP GO:0006357 regulation of transcription by RNA polymerase II IEA InterProScan predictions
CC GO:0016592 mediator complex IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013947 Mediator_Med14 9 208
No external refs found!