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  5. Bradi4g30470

Bradi4g30470


Description : related to ubiquitin 1


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g30470
Cluster HCCA clusters: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
101548 No alias ubiquitin 5 0.02 Orthogroups_2024-Update
At1g55060 No alias Polyubiquitin 12 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7K8] 0.03 Orthogroups_2024-Update
Brara.H01228.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Cre09.g396400 No alias related to ubiquitin 1 0.02 Orthogroups_2024-Update
Glyma.10G051100 No alias ubiquitin 4 0.03 Orthogroups_2024-Update
HORVU6Hr1G016150.3 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G021700.4 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Kfl00013_0160 kfl00013_0160_v1.... (at5g03240 : 110.0) encodes ubiquitin that is attached... 0.02 Orthogroups_2024-Update
Kfl00348_0100 kfl00348_0100_v1.... (at2g35635 : 236.0) encodes a ubiquitin-like protein... 0.02 Orthogroups_2024-Update
MA_53043g0010 No alias (at1g31340 : 234.0) Encodes a ubiquitin-related protein... 0.03 Orthogroups_2024-Update
MA_8884419g0010 No alias (at3g62250 : 211.0) ubiquitin 5 (UBQ5); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Mp8g11720.1 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis... 0.03 Orthogroups_2024-Update
Potri.001G263000 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Pp1s46_189V6 No alias polyubiquitin 0.03 Orthogroups_2024-Update
Sobic.004G050000.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predicted GO
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 79 150
No external refs found!