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Description : CCCH-type zinc finger family protein
Gene families : OG_42_0003004 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003004_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi5g25760 | |
| Cluster | HCCA clusters: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GRMZM2G041799 | No alias | CCCH-type zinc finger family protein | 0.03 | Orthogroups_2024-Update | |
| MA_126678g0010 | No alias | (at2g02160 : 155.0) CCCH-type zinc finger family... | 0.02 | Orthogroups_2024-Update | |
| PSME_00003774-RA | No alias | (at2g02160 : 180.0) CCCH-type zinc finger family... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004806 | triglyceride lipase activity | IEP | Predicted GO |
| MF | GO:0004834 | tryptophan synthase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005516 | calmodulin binding | IEP | Predicted GO |
| MF | GO:0005543 | phospholipid binding | IEP | Predicted GO |
| CC | GO:0005634 | nucleus | IEP | Predicted GO |
| CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
| CC | GO:0005777 | peroxisome | IEP | Predicted GO |
| BP | GO:0005985 | sucrose metabolic process | IEP | Predicted GO |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
| BP | GO:0006568 | tryptophan metabolic process | IEP | Predicted GO |
| BP | GO:0006586 | indolalkylamine metabolic process | IEP | Predicted GO |
| BP | GO:0006606 | protein import into nucleus | IEP | Predicted GO |
| BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
| BP | GO:0007031 | peroxisome organization | IEP | Predicted GO |
| MF | GO:0008289 | lipid binding | IEP | Predicted GO |
| BP | GO:0009235 | cobalamin metabolic process | IEP | Predicted GO |
| BP | GO:0009236 | cobalamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Predicted GO |
| BP | GO:0009725 | response to hormone | IEP | Predicted GO |
| BP | GO:0010033 | response to organic substance | IEP | Predicted GO |
| MF | GO:0016157 | sucrose synthase activity | IEP | Predicted GO |
| MF | GO:0016298 | lipase activity | IEP | Predicted GO |
| BP | GO:0016579 | protein deubiquitination | IEP | Predicted GO |
| CC | GO:0016592 | mediator complex | IEP | Predicted GO |
| MF | GO:0016852 | sirohydrochlorin cobaltochelatase activity | IEP | Predicted GO |
| BP | GO:0017038 | protein import | IEP | Predicted GO |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Predicted GO |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Predicted GO |
| MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
| BP | GO:0034504 | protein localization to nucleus | IEP | Predicted GO |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Predicted GO |
| MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Predicted GO |
| BP | GO:0042221 | response to chemical | IEP | Predicted GO |
| BP | GO:0042430 | indole-containing compound metabolic process | IEP | Predicted GO |
| CC | GO:0042579 | microbody | IEP | Predicted GO |
| MF | GO:0043168 | anion binding | IEP | Predicted GO |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044428 | nuclear part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
| BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
| BP | GO:0051170 | import into nucleus | IEP | Predicted GO |
| BP | GO:0051641 | cellular localization | IEP | Predicted GO |
| BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
| MF | GO:0061608 | nuclear import signal receptor activity | IEP | Predicted GO |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Predicted GO |
| MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Predicted GO |
| MF | GO:0140104 | molecular carrier activity | IEP | Predicted GO |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |