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  5. Glyma.01G032100

Glyma.01G032100


Description : Adaptor protein complex AP-1, gamma subunit


Gene families : OG_42_0002482 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.01G032100
Cluster HCCA clusters: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
At1g60070 No alias AP-1 complex subunit gamma [Source:UniProtKB/TrEMBL;Acc:F4IEP9] 0.03 Orthogroups_2024-Update
Bradi1g48257 No alias Adaptor protein complex AP-1, gamma subunit 0.04 Orthogroups_2024-Update
Bradi3g54597 No alias Adaptor protein complex AP-1, gamma subunit 0.04 Orthogroups_2024-Update
GRMZM2G054210 No alias Adaptor protein complex AP-1, gamma subunit 0.03 Orthogroups_2024-Update
HORVU6Hr1G087920.7 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.03 Orthogroups_2024-Update
Kfl00126_0190 kfl00126_0190_v1.1 (at1g60070 : 871.0) Adaptor protein complex AP-1, gamma... 0.03 Orthogroups_2024-Update
Pp1s211_68V6 No alias adaptor-related protein complex gamma 1 subunit 0.02 Orthogroups_2024-Update
Pp1s26_191V6 No alias ap-1 complex subunit gamma- 0.05 Orthogroups_2024-Update
Seita.4G059700.1 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.04 Orthogroups_2024-Update
evm.model.tig00000217.33 No alias (at1g60070 : 416.0) Adaptor protein complex AP-1, gamma... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
CC GO:0030117 membrane coat IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008152 Clathrin_a/b/g-adaptin_app_Ig 757 869
IPR002553 Clathrin/coatomer_adapt-like_N 27 578
No external refs found!