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  5. Glyma.05G004200

Glyma.05G004200


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0002181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G004200
Cluster HCCA clusters: Cluster_334


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 533 552
IPR002885 Pentatricopeptide_repeat 494 524
IPR002885 Pentatricopeptide_repeat 460 487
IPR002885 Pentatricopeptide_repeat 182 202
IPR002885 Pentatricopeptide_repeat 211 260
IPR002885 Pentatricopeptide_repeat 281 329
IPR002885 Pentatricopeptide_repeat 351 400
No external refs found!