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  5. Glyma.06G254500

Glyma.06G254500


Description : myosin 2


Gene families : OG_42_0000130 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000130_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G254500
Cluster HCCA clusters: Cluster_409

Target Alias Description ECC score Gene Family Method Actions
At1g50360 No alias Myosin-3 [Source:UniProtKB/Swiss-Prot;Acc:F4I507] 0.05 Orthogroups_2024-Update
At2g20290 No alias Myosin-13 [Source:UniProtKB/Swiss-Prot;Acc:F4IUG9] 0.04 Orthogroups_2024-Update
At5g20470 No alias Myosin [Source:UniProtKB/TrEMBL;Acc:F4K5I9] 0.04 Orthogroups_2024-Update
At5g54280 No alias Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:F4K0A6] 0.03 Orthogroups_2024-Update
Bradi3g29700 No alias myosin XI B 0.03 Orthogroups_2024-Update
GRMZM2G449909 No alias myosin, putative 0.03 Orthogroups_2024-Update
Glyma.10G041700 No alias myosin 2 0.03 Orthogroups_2024-Update
Glyma.13G107400 No alias Myosin family protein with Dil domain 0.03 Orthogroups_2024-Update
Glyma.14G098300 No alias myosin, putative 0.03 Orthogroups_2024-Update
HORVU1Hr1G044020.1 No alias class XI myosin microfilament-based motor protein 0.03 Orthogroups_2024-Update
Kfl00001_0710 kfl00001_0710_v1.1 (at1g08730 : 1610.0) Class XI myosin gene; XIC; CONTAINS... 0.02 Orthogroups_2024-Update
Mp3g23480.1 No alias class VIII myosin microfilament-based motor protein 0.02 Orthogroups_2024-Update
PSME_00003157-RA No alias (at2g31900 : 1831.0) Encodes an novel myosin isoform.;... 0.02 Orthogroups_2024-Update
Pp1s199_21V6 No alias myosin 0.03 Orthogroups_2024-Update
Sopen07g020400 No alias Myosin head (motor domain) 0.04 Orthogroups_2024-Update
evm.model.tig00000056.26 No alias (at2g20290 : 520.0) member of Myosin-like proteins;... 0.02 Orthogroups_2024-Update
evm.model.tig00020614.58 No alias (at1g04160 : 237.0) Encodes a member of the type XI... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016459 myosin complex IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001609 Myosin_head_motor_dom 187 828
IPR000048 IQ_motif_EF-hand-BS 904 921
IPR000048 IQ_motif_EF-hand-BS 869 885
No external refs found!