Glyma.08G222400


Description : Coatomer, beta subunit


Gene families : OG_42_0003181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003181_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G222400
Cluster HCCA clusters: Cluster_409

Target Alias Description ECC score Gene Family Method Actions
Bradi2g10910 No alias Coatomer, beta subunit 0.03 Orthogroups_2024-Update
Bradi2g10950 No alias Coatomer, beta subunit 0.05 Orthogroups_2024-Update
Brara.A00624.1 No alias subunit beta of cargo adaptor F-subcomplex 0.03 Orthogroups_2024-Update
Brara.K01651.1 No alias subunit beta of cargo adaptor F-subcomplex 0.04 Orthogroups_2024-Update
Cre04.g217921 No alias Coatomer, beta subunit 0.04 Orthogroups_2024-Update
Kfl00013_0310 kfl00013_0310_v1.1 (at4g31480 : 1299.0) Coatomer, beta subunit; FUNCTIONS... 0.01 Orthogroups_2024-Update
MA_10431517g0010 No alias (at4g31480 : 847.0) Coatomer, beta subunit; FUNCTIONS... 0.04 Orthogroups_2024-Update
MA_230138g0010 No alias (at4g31480 : 974.0) Coatomer, beta subunit; FUNCTIONS... 0.03 Orthogroups_2024-Update
Mp5g08450.1 No alias subunit beta of cargo adaptor F-subcomplex 0.02 Orthogroups_2024-Update
PSME_00015393-RA No alias (at4g31480 : 1425.0) Coatomer, beta subunit; FUNCTIONS... 0.04 Orthogroups_2024-Update
Pp1s168_28V6 No alias coatomer subunit beta 0.04 Orthogroups_2024-Update
Pp1s309_15V6 No alias coatomer subunit beta 0.05 Orthogroups_2024-Update
Pp1s42_100V6 No alias coatomer subunit beta 0.05 Orthogroups_2024-Update
Seita.5G038000.1 No alias subunit beta of cargo adaptor F-subcomplex 0.04 Orthogroups_2024-Update
Seita.5G398100.1 No alias subunit beta of cargo adaptor F-subcomplex 0.05 Orthogroups_2024-Update
Sobic.003G134800.1 No alias subunit beta of cargo adaptor F-subcomplex 0.02 Orthogroups_2024-Update
Solyc01g007150 No alias Coatomer subunit beta (AHRD V3.3 *** K4AST1_SOLLC) 0.04 Orthogroups_2024-Update
Solyc10g081920 No alias Coatomer subunit beta (AHRD V3.3 *** M1CQJ9_SOLTU) 0.02 Orthogroups_2024-Update
Sopen10g032430 No alias Adaptin N terminal region 0.02 Orthogroups_2024-Update
evm.model.contig_560.13 No alias (at4g31480 : 768.0) Coatomer, beta subunit; FUNCTIONS... 0.02 Orthogroups_2024-Update
evm.model.tig00020553.156 No alias (at4g31480 : 943.0) Coatomer, beta subunit; FUNCTIONS... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
CC GO:0030117 membrane coat IEA InterProScan predictions
CC GO:0030126 COPI vesicle coat IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
CC GO:0000145 exocyst IEP Predicted GO
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0000149 SNARE binding IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0019905 syntaxin binding IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR029446 COPB1_appendage_platform_dom 815 942
IPR002553 Clathrin/coatomer_adapt-like_N 20 466
IPR011710 Coatomer_bsu_C 670 808
No external refs found!