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  5. Glyma.10G255700

Glyma.10G255700


Description : pre-mRNA-processing protein 40B


Gene families : OG_42_0002795 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002795_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.10G255700
Cluster HCCA clusters: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
A4A49_12586 No alias pre-mrna-processing protein 40a 0.02 Orthogroups_2024-Update
Bradi4g20404 No alias pre-mRNA-processing protein 40A 0.04 Orthogroups_2024-Update
MA_10433850g0010 No alias (at1g44910 : 302.0) Binds the carboxyl-terminal domain... 0.03 Orthogroups_2024-Update
Mp2g00410.1 No alias pre-mRNA-processing protein (PRP40A/B) 0.02 Orthogroups_2024-Update
PSME_00000080-RA No alias (at1g44910 : 655.0) Binds the carboxyl-terminal domain... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR002713 FF_domain 818 865
IPR002713 FF_domain 540 589
IPR002713 FF_domain 612 657
IPR002713 FF_domain 473 522
IPR002713 FF_domain 682 737
IPR001202 WW_dom 264 290
IPR001202 WW_dom 221 249
No external refs found!