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  5. Glyma.11G126700

Glyma.11G126700


Description : FRS (FAR1 Related Sequences) transcription factor family


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.11G126700
Cluster HCCA clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
At4g19990 No alias FAR1-related sequence 1 [Source:UniProtKB/TrEMBL;Acc:F4JU19] 0.03 Orthogroups_2024-Update
Bradi1g29147 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Bradi1g46084 No alias FAR1-related sequence 5 0.06 Orthogroups_2024-Update
Bradi4g15500 No alias Function unknown 0.04 Orthogroups_2024-Update
Brara.A02741.1 No alias transcriptional regulator of red/far-red light... 0.02 Orthogroups_2024-Update
Brara.G02019.1 No alias FRS/FRF-type transcription factor 0.05 Orthogroups_2024-Update
GRMZM2G148940 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
LOC_Os11g17300 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Seita.2G330400.1 No alias FRS/FRF-type transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004330 FAR1_DNA_bnd_dom 60 141
IPR018289 MULE_transposase_dom 262 356
No external refs found!