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  5. Solyc02g087240

Solyc02g087240


Description : NADH dehydrogenase (AHRD V3.3 *** Q43840_SOLTU)


Gene families : OG_42_0005686 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005686_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g087240
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Mp6g01100.1 No alias component NQO1 of NADH dehydrogenase electron input (module N) 0.02 Orthogroups_2024-Update
evm.model.tig00000852.34 No alias (at5g08530 : 714.0) 51 kDa subunit of complex I (CI51);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP Predicted GO
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR019575 Nuop51_4Fe4S-bd 431 513
IPR019554 Soluble_ligand-bd 341 390
IPR011538 Nuo51_FMN-bd 145 314
No external refs found!