Description : AMP-dependent synthetase and ligase family protein
Gene families : OG_42_0004318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004318_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.11G254100 | |
Cluster | HCCA clusters: Cluster_466 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Mp4g19160.1 | No alias | Probable acyl-activating enzyme 16, chloroplastic... | 0.04 | Orthogroups_2024-Update | |
Pp1s222_97V6 | No alias | amp-dependent synthetase and ligase | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Predicted GO |
CC | GO:0000176 | nuclear exosome (RNase complex) | IEP | Predicted GO |
CC | GO:0000178 | exosome (RNase complex) | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0004334 | fumarylacetoacetase activity | IEP | Predicted GO |
MF | GO:0005086 | ARF guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Predicted GO |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predicted GO |
BP | GO:0009966 | regulation of signal transduction | IEP | Predicted GO |
BP | GO:0010646 | regulation of cell communication | IEP | Predicted GO |
MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
CC | GO:0016592 | mediator complex | IEP | Predicted GO |
MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
MF | GO:0016822 | hydrolase activity, acting on acid carbon-carbon bonds | IEP | Predicted GO |
MF | GO:0016823 | hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances | IEP | Predicted GO |
CC | GO:0017119 | Golgi transport complex | IEP | Predicted GO |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | Predicted GO |
BP | GO:0023051 | regulation of signaling | IEP | Predicted GO |
CC | GO:0030126 | COPI vesicle coat | IEP | Predicted GO |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | Predicted GO |
MF | GO:0034061 | DNA polymerase activity | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | Predicted GO |
MF | GO:0051011 | microtubule minus-end binding | IEP | Predicted GO |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | Predicted GO |
BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Predicted GO |
CC | GO:1903293 | phosphatase complex | IEP | Predicted GO |
CC | GO:1905354 | exoribonuclease complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000873 | AMP-dep_Synth/Lig | 86 | 593 |
No external refs found! |