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  5. Glyma.12G023300

Glyma.12G023300


Description : SKU5 similar 5


Gene families : OG_42_0000592 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.12G023300
Cluster HCCA clusters: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
229918 No alias SKU5 similar 4 0.03 Orthogroups_2024-Update
410532 No alias SKU5 similar 4 0.07 Orthogroups_2024-Update
A4A49_13772 No alias l-ascorbate oxidase-like protein 0.03 Orthogroups_2024-Update
At4g38420 No alias Putative pectinesterase [Source:UniProtKB/TrEMBL;Acc:Q8VYB3] 0.04 Orthogroups_2024-Update
Brara.A01224.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Brara.B02254.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update
Brara.H00528.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
PSME_00000925-RA No alias (at4g22010 : 780.0) SKU5 similar 4 (sks4); FUNCTIONS... 0.03 Orthogroups_2024-Update
Seita.4G261600.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Sopen02g025380 No alias Multicopper oxidase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
InterPro domains Description Start Stop
IPR011707 Cu-oxidase_3 39 152
IPR001117 Cu-oxidase 166 300
IPR011706 Cu-oxidase_2 383 517
No external refs found!