Solyc02g087520


Description : Pathogenesis-related thaumatin family protein (AHRD V3.3 *** G7KK13_MEDTR)


Gene families : OG_42_0000045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g087520
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
402999 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
At1g18250 No alias Pathogenesis-related thaumatin superfamily protein... 0.03 Orthogroups_2024-Update
Bradi1g68330 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Brara.A01423.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.02G220900 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G063730.2 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Predicted GO
BP GO:0009245 lipid A biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0019213 deacetylase activity IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046493 lipid A metabolic process IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:1901269 lipooligosaccharide metabolic process IEP Predicted GO
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 40 256
No external refs found!