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  5. Glyma.13G037600

Glyma.13G037600


Description : SEUSS transcriptional co-regulator


Gene families : OG_42_0001027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.13G037600
Cluster HCCA clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
At1g43850 No alias Transcriptional corepressor SEUSS... 0.03 Orthogroups_2024-Update
At4g25520 No alias Probable transcriptional regulator SLK1... 0.03 Orthogroups_2024-Update
Bradi4g22770 No alias SEUSS transcriptional co-regulator 0.03 Orthogroups_2024-Update
Glyma.14G119800 No alias SEUSS transcriptional co-regulator 0.05 Orthogroups_2024-Update
Glyma.16G198200 No alias SEUSS-like 2 0.03 Orthogroups_2024-Update
MA_12796g0010 No alias (at1g43850 : 444.0) Encodes a transcriptional... 0.02 Orthogroups_2024-Update
MA_33392g0010 No alias (at5g62090 : 131.0) SEUSS-like 2 (SLK2); BEST... 0.03 Orthogroups_2024-Update
MA_9051g0020 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Mp1g03270.1 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.03 Orthogroups_2024-Update
PSME_00036824-RA No alias (at5g62090 : 384.0) SEUSS-like 2 (SLK2); BEST... 0.04 Orthogroups_2024-Update
PSME_00037034-RA No alias (at1g43850 : 471.0) Encodes a transcriptional... 0.03 Orthogroups_2024-Update
Seita.4G015400.1 No alias adapter component *(SEU/SLK) of transcriptional... 0.03 Orthogroups_2024-Update
Seita.8G073600.1 No alias adapter component *(SEU/SLK) of transcriptional... 0.03 Orthogroups_2024-Update
Sobic.005G079800.1 No alias adapter component *(SEU/SLK) of transcriptional... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0030173 integral component of Golgi membrane IEP Predicted GO
CC GO:0031228 intrinsic component of Golgi membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 342 596
No external refs found!