Description : RNA recognition motif (RRM)-containing protein
Gene families : OG_42_0006511 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006511_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.14G192900 | |
Cluster | HCCA clusters: Cluster_1 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_37732 | No alias | zinc finger ccch domain-containing protein 25 | 0.03 | Orthogroups_2024-Update | |
Kfl00271_0060 | kfl00271_0060_v1.1 | (at3g47120 : 229.0) RNA recognition motif... | 0.03 | Orthogroups_2024-Update | |
Potri.009G044900 | No alias | RNA recognition motif (RRM)-containing protein | 0.04 | Orthogroups_2024-Update | |
Sopen03g038280 | No alias | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 0.03 | Orthogroups_2024-Update | |
evm.model.tig00020603.25 | No alias | (at3g47120 : 189.0) RNA recognition motif... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
MF | GO:0046872 | metal ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003712 | transcription coregulator activity | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
CC | GO:0005694 | chromosome | IEP | Predicted GO |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
BP | GO:0006476 | protein deacetylation | IEP | Predicted GO |
BP | GO:0006606 | protein import into nucleus | IEP | Predicted GO |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
BP | GO:0016458 | gene silencing | IEP | Predicted GO |
BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
BP | GO:0016570 | histone modification | IEP | Predicted GO |
BP | GO:0016575 | histone deacetylation | IEP | Predicted GO |
CC | GO:0016592 | mediator complex | IEP | Predicted GO |
BP | GO:0017038 | protein import | IEP | Predicted GO |
BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0033365 | protein localization to organelle | IEP | Predicted GO |
BP | GO:0034504 | protein localization to nucleus | IEP | Predicted GO |
BP | GO:0034613 | cellular protein localization | IEP | Predicted GO |
BP | GO:0035601 | protein deacylation | IEP | Predicted GO |
BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
BP | GO:0051170 | import into nucleus | IEP | Predicted GO |
BP | GO:0070727 | cellular macromolecule localization | IEP | Predicted GO |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | Predicted GO |
BP | GO:0098732 | macromolecule deacylation | IEP | Predicted GO |
No external refs found! |