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  5. Glyma.16G217700

Glyma.16G217700


Description : Homeodomain-like superfamily protein


Gene families : OG_42_0000380 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.16G217700
Cluster HCCA clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
A4A49_01132 No alias protein reveille 8 0.07 Orthogroups_2024-Update
At1g01520 No alias ASG4 [Source:UniProtKB/TrEMBL;Acc:A0A178W835] 0.04 Orthogroups_2024-Update
At2g46830 No alias Protein CCA1 [Source:UniProtKB/Swiss-Prot;Acc:P92973] 0.08 Orthogroups_2024-Update
At3g09600 No alias Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3] 0.05 Orthogroups_2024-Update
At5g17300 No alias Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6] 0.03 Orthogroups_2024-Update
Bradi3g51757 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.A03523.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.07 Orthogroups_2024-Update
Brara.B00704.1 No alias transcription factor *(REVEILLE) 0.04 Orthogroups_2024-Update
Brara.C00086.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.06 Orthogroups_2024-Update
Brara.E00100.1 No alias circadian clock core oscillator protein *(LHY/CCA1) &... 0.06 Orthogroups_2024-Update
Brara.E01373.1 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
Brara.E03078.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.04 Orthogroups_2024-Update
GRMZM2G118693 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.02G241000 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.03G177300 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G025030.1 No alias transcription factor *(REVEILLE) 0.04 Orthogroups_2024-Update
HORVU7Hr1G121210.4 No alias transcription factor *(REVEILLE) 0.02 Orthogroups_2024-Update
LOC_Os06g51260 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
Mp2g14310.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.02 Orthogroups_2024-Update
PSME_00043429-RA No alias (at5g17300 : 121.0) Myb-like transcription factor that... 0.03 Orthogroups_2024-Update
Potri.002G163100 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.004G074300 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G133000 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Pp1s198_135V6 No alias dna binding protein 0.03 Orthogroups_2024-Update
Pp1s325_68V6 No alias lhy protein 0.02 Orthogroups_2024-Update
Seita.4G004600.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Seita.4G288100.1 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
Seita.7G212900.1 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
Sobic.004G281800.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.02 Orthogroups_2024-Update
Sobic.010G275700.1 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
Solyc01g095030 No alias Myb family transcription factor family protein (AHRD... 0.04 Orthogroups_2024-Update
Solyc03g098320 No alias Myb transcription factor (AHRD V3.3 *** A0A072UBN0_MEDTR) 0.04 Orthogroups_2024-Update
Solyc10g084370 No alias MYB transcription factor (AHRD V3.3 *** B5TV64_CAMSI) 0.05 Orthogroups_2024-Update
Sopen01g038820 No alias Myb-like DNA-binding domain 0.05 Orthogroups_2024-Update
Sopen03g029070 No alias Myb-like DNA-binding domain 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 56 99
No external refs found!