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  5. Glyma.17G039300

Glyma.17G039300


Description : pleiotropic drug resistance 9


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G039300
Cluster HCCA clusters: Cluster_369

Target Alias Description ECC score Gene Family Method Actions
267739 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
429390 No alias pleiotropic drug resistance 12 0.05 Orthogroups_2024-Update
Brara.A03065.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.D02264.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.F01033.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.H02545.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Glyma.17G039200 No alias pleiotropic drug resistance 9 0.03 Orthogroups_2024-Update
Glyma.19G192900 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
LOC_Os01g08260 No alias pleiotropic drug resistance protein 4, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g29570 No alias pleiotropic drug resistance protein 3, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g43120 No alias Plant PDR ABC transporter associated domain containing... 0.02 Orthogroups_2024-Update
PSME_00009473-RA No alias (at2g26910 : 1773.0) pleiotropic drug resistance 4... 0.04 Orthogroups_2024-Update
Potri.006G248500 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Seita.9G187800.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Solyc05g053600 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc12g100180 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003713 transcription coactivator activity IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR013581 PDR_assoc 744 803
IPR013525 ABC_2_trans 1177 1391
IPR013525 ABC_2_trans 526 737
IPR003439 ABC_transporter-like 193 373
IPR029481 ABC_trans_N 115 165
IPR003439 ABC_transporter-like 880 1031
No external refs found!