Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.17G165800 | |
Cluster | HCCA clusters: Cluster_417 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At1g14470 | No alias | Pentatricopeptide repeat-containing protein At1g14470... | 0.02 | Orthogroups_2024-Update | |
At5g52630 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Orthogroups_2024-Update | |
Bradi1g51700 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi2g62740 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | Orthogroups_2024-Update | |
Bradi3g32220 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Brara.F00497.1 | No alias | RNA editing factor *(OTP82) | 0.02 | Orthogroups_2024-Update | |
HORVU0Hr1G015970.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
LOC_Os05g30710 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os08g42610 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_40997g0010 | No alias | (at4g02750 : 642.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
MA_59599g0010 | No alias | (at3g49170 : 646.0) embryo defective 2261 (EMB2261);... | 0.02 | Orthogroups_2024-Update | |
MA_778985g0010 | No alias | (at2g27610 : 621.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
PSME_00005903-RA | No alias | (at2g22070 : 612.0) pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
PSME_00033049-RA | No alias | (at1g11290 : 583.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
PSME_00037497-RA | No alias | (at4g13650 : 692.0) Pentatricopeptide repeat (PPR)... | 0.01 | Orthogroups_2024-Update | |
Pp1s178_15V6 | No alias | T1B8.1; pentatricopeptide (PPR) repeat-containing... | 0.03 | Orthogroups_2024-Update | |
Seita.2G047600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.6G213800.1 | No alias | RNA editing factor *(DOT4) | 0.03 | Orthogroups_2024-Update | |
Seita.9G375400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.002G065200.1 | No alias | RNA editing factor *(CRR28) | 0.03 | Orthogroups_2024-Update | |
Sobic.003G223000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.007G187600.1 | No alias | processivity component *(REV7) of DNA polymerase zeta complex | 0.03 | Orthogroups_2024-Update | |
Sobic.009G079400.1 | No alias | RNA editing factor *(ECD1) | 0.02 | Orthogroups_2024-Update | |
Solyc07g008890 | No alias | Pentatricopeptide repeat superfamily protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Sopen01g032600 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Predicted GO |
MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | Predicted GO |
MF | GO:0003852 | 2-isopropylmalate synthase activity | IEP | Predicted GO |
MF | GO:0004177 | aminopeptidase activity | IEP | Predicted GO |
MF | GO:0004392 | heme oxygenase (decyclizing) activity | IEP | Predicted GO |
MF | GO:0004602 | glutathione peroxidase activity | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
BP | GO:0006508 | proteolysis | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006551 | leucine metabolic process | IEP | Predicted GO |
BP | GO:0006643 | membrane lipid metabolic process | IEP | Predicted GO |
BP | GO:0006664 | glycolipid metabolic process | IEP | Predicted GO |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006788 | heme oxidation | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
MF | GO:0008238 | exopeptidase activity | IEP | Predicted GO |
MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009098 | leucine biosynthetic process | IEP | Predicted GO |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | Predicted GO |
MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
MF | GO:0019842 | vitamin binding | IEP | Predicted GO |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
CC | GO:0035658 | Mon1-Ccz1 complex | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
BP | GO:0042168 | heme metabolic process | IEP | Predicted GO |
BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
CC | GO:0044440 | endosomal part | IEP | Predicted GO |
BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Predicted GO |
MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Predicted GO |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
MF | GO:0070279 | vitamin B6 binding | IEP | Predicted GO |
BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:1903509 | liposaccharide metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 494 | 618 |
IPR002885 | Pentatricopeptide_repeat | 320 | 368 |
IPR002885 | Pentatricopeptide_repeat | 84 | 131 |
IPR002885 | Pentatricopeptide_repeat | 156 | 181 |
IPR002885 | Pentatricopeptide_repeat | 184 | 212 |
IPR002885 | Pentatricopeptide_repeat | 395 | 420 |
IPR002885 | Pentatricopeptide_repeat | 215 | 241 |
IPR002885 | Pentatricopeptide_repeat | 286 | 318 |
No external refs found! |