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  5. Glyma.17G180800

Glyma.17G180800


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_42_0000449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G180800
Cluster HCCA clusters: Cluster_334

Target Alias Description ECC score Gene Family Method Actions
Potri.005G207200 No alias phytochrome interacting factor 4 0.03 Orthogroups_2024-Update
Seita.1G357300.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Seita.3G384900.1 No alias regulatory protein *(PIF) of red/far-red light... 0.02 Orthogroups_2024-Update
Solyc04g007430 No alias bHLH transcription factor 031 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 91 137
No external refs found!