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  5. Glyma.20G109400

Glyma.20G109400


Description : indeterminate(ID)-domain 4


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.20G109400
Cluster HCCA clusters: Cluster_417

Target Alias Description ECC score Gene Family Method Actions
A4A49_23823 No alias zinc finger protein magpie 0.03 Orthogroups_2024-Update
At2g02070 No alias Protein indeterminate-domain 5, chloroplastic... 0.03 Orthogroups_2024-Update
At3g50700 No alias Protein indeterminate-domain 2... 0.03 Orthogroups_2024-Update
Bradi1g18370 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Brara.I02041.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Glyma.07G158000 No alias indeterminate(ID)-domain 4 0.04 Orthogroups_2024-Update
Glyma.08G092300 No alias indeterminate(ID)-domain 14 0.03 Orthogroups_2024-Update
Glyma.19G180400 No alias indeterminate(ID)-domain 4 0.05 Orthogroups_2024-Update
Glyma.20G005800 No alias C2H2-like zinc finger protein 0.04 Orthogroups_2024-Update
Glyma.20G184000 No alias indeterminate(ID)-domain 4 0.03 Orthogroups_2024-Update
MA_10436688g0010 No alias (at1g68130 : 189.0) indeterminate(ID)-domain 14 (IDD14);... 0.02 Orthogroups_2024-Update
PSME_00045485-RA No alias (at1g03840 : 315.0) MGP is a nuclear-localized putative... 0.02 Orthogroups_2024-Update
Potri.010G099100 No alias indeterminate(ID)-domain 5 0.03 Orthogroups_2024-Update
Seita.7G201000.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
Solyc03g121660 No alias Zinc finger family protein (AHRD V3.3 *** D7MN23_ARALL) 0.03 Orthogroups_2024-Update
Solyc11g069240 No alias Zinc finger family protein (AHRD V3.3 *** S8C619_9LAMI) 0.03 Orthogroups_2024-Update
Sopen01g042900 No alias Zinc finger, C2H2 type 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0031023 microtubule organizing center organization IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 71 93
No external refs found!