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  5. Glyma.20G218400

Glyma.20G218400


Description : Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein


Gene families : OG_42_0001408 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001408_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.20G218400
Cluster HCCA clusters: Cluster_368

Target Alias Description ECC score Gene Family Method Actions
Bradi2g31107 No alias JUMONJI 14 0.02 Orthogroups_2024-Update
Brara.H00747.1 No alias histone demethylase *(PKDM7) 0.03 Orthogroups_2024-Update
Seita.4G119000.1 No alias histone demethylase *(PKDM7) 0.03 Orthogroups_2024-Update
Sopen04g005120 No alias JmjC domain, hydroxylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004198 Znf_C5HC2 613 663
IPR003349 JmjN 149 182
IPR003347 JmjC_dom 390 506
IPR003888 FYrich_N 1037 1079
IPR003889 FYrich_C 1087 1170
No external refs found!