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  5. A4A49_38490

A4A49_38490


Description : phosphomethylpyrimidine synthase, chloroplastic


Gene families : OG_42_0006147 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_38490
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
120890 No alias thiaminC 0.05 Orthogroups_2024-Update
152730 No alias thiaminC 0.04 Orthogroups_2024-Update
Bradi1g12550 No alias thiaminC 0.03 Orthogroups_2024-Update
Glyma.11G176200 No alias thiaminC 0.04 Orthogroups_2024-Update
Glyma.18G065700 No alias thiaminC 0.06 Orthogroups_2024-Update
Kfl00330_0080 kfl00330_0080_v1.1 (at2g29630 : 957.0) thiaminC (THIC); CONTAINS InterPro... 0.02 Orthogroups_2024-Update
LOC_Os03g47610 No alias thiamine biosynthesis protein thiC, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G249200 No alias thiaminC 0.03 Orthogroups_2024-Update
Potri.009G043200 No alias thiaminC 0.03 Orthogroups_2024-Update
Pp1s402_42V6 No alias thiamin biosynthesis protein 0.04 Orthogroups_2024-Update
Pp1s88_47V6 No alias thiamin biosynthesis protein 0.02 Orthogroups_2024-Update
Solyc06g006080 No alias thiamine biosynthesis protein ThiC 0.03 Orthogroups_2024-Update
Sopen06g002030 No alias ThiC family 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009228 thiamine biosynthetic process IEA InterProScan predictions
MF GO:0051536 iron-sulfur cluster binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025747 ThiC-associated_dom 94 158
IPR002817 ThiC/BzaA/B 166 586
No external refs found!