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  5. Potri.001G243300

Potri.001G243300


Description : zinc finger (C3HC4-type RING finger) family protein


Gene families : OG_42_0001974 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001974_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G243300
Cluster HCCA clusters: cluster_0008

Target Alias Description ECC score Gene Family Method Actions
A4A49_12307 No alias e3 ubiquitin-protein ligase rduf1 0.04 Orthogroups_2024-Update
GRMZM2G364612 No alias zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
Glyma.13G338400 No alias RING-H2 finger C2A 0.02 Orthogroups_2024-Update
Glyma.18G184200 No alias RING-H2 finger C2A 0.02 Orthogroups_2024-Update
HORVU1Hr1G004330.4 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 Orthogroups_2024-Update
HORVU7Hr1G055010.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
LOC_Os05g01940 No alias zinc finger, RING-type, putative, expressed 0.03 Orthogroups_2024-Update
Sobic.001G422900.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.009G010400.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 176 218
IPR010543 DUF1117 236 345
IPR039525 RNF126-like_zinc-ribbon 7 48
No external refs found!